Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1712 |
Symbol | sucC |
ID | 4256553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2021592 |
End bp | 2022758 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122370 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_737762 |
Protein GI | 114047212 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00288074 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC ATGAGTATCA GGCAAAATCC CTATTTGCCG AATATGGTTT ACCAGTGTCA GAAGGTTTTG CATGTGATAC AGCCCAAGAA GCTGTAGAAG CGGCAGGCCG TATTGGCGGA AATTTATGGG TTGTTAAGTG TCAAGTACAC GCCGGCGGCC GCGGTAAAGC GGGTGGCGTT AAAGTCACTG GCGATAAAGA AGAAATCAGA GCCTTTGCCG AACACTGGTT AGGCAAAAAT CTGGTGACTT ATCAAACAGA TGAGAAAGGT CAGCCTGTTG CTAAAATTTT AGTAGAAAGC TGCACCGACA TCGCTAACGA ACTGTACTTA GGTGCAGTAG TTGACCGTGC TACCCGTCGC GTGGTGTTCA TGGCTTCTAC CGAAGGTGGT GTTGAGATTG AGAAAGTGGC CGAAGAAACG CCAGAACTCA TTCACAAAGC GATCATCGAT CCACTGACTG GTCCTCAACC ATACCAAGCA CGTGATCTTG GCTTCAAACT GGGCTTAAAC CCAACTCAAA TGAAGCAATT CACCAAGATC TTCATGGGTC TGGCGACTAT GTTCGTTGAT CACGATTTTG CACTGCTGGA AATCAACCCA CTGGTTATCA CCACTGAAGG TAACCTGCAC TGCTTAGACG GTAAAATTGG TATCGATGGT AACGCACTGT TCCGTCAACC AAAAATCAAA GCAATGCACG ATCCATCACA GGATGACGCC CGTGAAGCTC ACGCTGCAAT GTTCGAACTG AACTATGTTG CGCTGGACGG AAACGTGGGT TGTATGGTGA ACGGTGCTGG CCTAGCAATG GGTACTATGG ACATCGTTAA CCTGCACGGC GGCAAGCCAG CTAACTTCCT CGACGTAGGT GGTGGCGCGA CTAAAGAACG TGTTGCTGAA GCATTCAAGA TCATTCTGTC TGACAGCAAT GTGAAAGCCG TTCTGGTTAA CATCTTCGGT GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATTG GCGCTGTTAA AGAAGTTGGC GTTAAAGTTC CAGTTGTAGT GCGTTTAGAA GGTACTAACG CTGAATTAGG CCGTGAAGTA TTAGCTAAAT CAGGTCTTGA TATCATTGCA GCTAACAGTC TGACTGATGC GGCTGAGCAA GTAGTTAAAG CTGCGGAGGG CAAATAA
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Protein sequence | MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGRIGG NLWVVKCQVH AGGRGKAGGV KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR VVFMASTEGG VEIEKVAEET PELIHKAIID PLTGPQPYQA RDLGFKLGLN PTQMKQFTKI FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQPKIK AMHDPSQDDA REAHAAMFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV LAKSGLDIIA ANSLTDAAEQ VVKAAEGK
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