| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1711 |
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| Symbol | |
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| ID | 4256552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2020276 |
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| End bp | 2021472 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122369 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_737761 |
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| Protein GI | 114047211 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0268778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AAATCAAGGT ACCCGTACTG CCAGAATCTG TTGCCGACGC AACTATCGCC
ACTTGGCACG TAAAAGTGGG TGAGCAAGTT TCTCGTGATC AAAATCTGGT TGATATTGAA
ACTGACAAAG TCGTACTGGA AGTGGTTGCA CCAGAAGATG GTCACATCGG TGAGTTCCTG
TTCCAAGAAG GCGATACCGT TCTGGGCGAG CAAGTCATTG CTAAGTTCAT CGCGGGTGCG
GTTTCTGGTC AAGAAGTGAC TAAAGCCGAA GCTGAAGCTG CTGCACCTGT TGCCGCTGCT
GTGACTGAAG AGTCTAACGA TGCATTAAGC CCATCAGTAC GTCGTTTACT GGCTGAGCAC
AATGTTGATG CGAGCAAAGT GAAGGGCACT GGTGTCGGTG GCCGTATCAC TAAAGAAGAC
GTTGAAGCCT TTATCAAGTC TGCGCCTAAA GCGGCAGCTG CCCCTGCGGC TCCAGCGGTA
CAACCTTTAG CGGCAGGTCG TAGCGAGAAG CGTGTTCCAA TGACACGTTT ACGTAAGACT
ATCGCTAACC GTTTATTAGA AGCGAAAAAC TCTACCGCGA TGCTCACGAC CTTCAACGAA
GTGAACATGA AGCCAATCAT GGATATCCGT AAGCAATATC AGGAAATCTT TGAAAAGCGC
CACGGTATCC GTTTAGGTTT CATGTCTTTC TACGTGAAAG CGGTTACTGA AGCGCTGAAA
CGCTTCCCAG AAGTGAACGC GTCAATCGAC GGTGACGATA TCGTTTACCA CAACTACTTC
GACGTCAGCA TCGCTGTATC GACTCCACGT GGTCTGGTCA CCCCAGTATT GCGTGATACC
GATACCATGA GCCTGGCTGA TATCGAAAAA GCAGTACGCG ATCTGGCGAT CAAAGGCCGT
GATGGCAAGC TGACTGTCGC TGATATGACT GGCGGTAACT TCACTGTGAC TAACGGTGGT
GTATTCGGCT CGTTAATGTC TACCCCAATT TTAAACCTGC CACAGAGCGC GATTTTAGGC
ATGCACGCCA TTAAAGACCG CCCAATGGCA GTCAATGGTC AGGTTGAAAT CCTGCCCATG
ATGTACCTAG CTCTCTCATA TGACCATCGT ATTGTCGATG GCCGTGAGTC AGTTGGCTTC
TTAGTCGCCA TTAAAGACTT CTTGGAAGAC CCAACTCGTC TGCTACTTGA CCTATAA
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVKVGEQV SRDQNLVDIE TDKVVLEVVA PEDGHIGEFL
FQEGDTVLGE QVIAKFIAGA VSGQEVTKAE AEAAAPVAAA VTEESNDALS PSVRRLLAEH
NVDASKVKGT GVGGRITKED VEAFIKSAPK AAAAPAAPAV QPLAAGRSEK RVPMTRLRKT
IANRLLEAKN STAMLTTFNE VNMKPIMDIR KQYQEIFEKR HGIRLGFMSF YVKAVTEALK
RFPEVNASID GDDIVYHNYF DVSIAVSTPR GLVTPVLRDT DTMSLADIEK AVRDLAIKGR
DGKLTVADMT GGNFTVTNGG VFGSLMSTPI LNLPQSAILG MHAIKDRPMA VNGQVEILPM
MYLALSYDHR IVDGRESVGF LVAIKDFLED PTRLLLDL
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