| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1710 |
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| Symbol | sucA |
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| ID | 4256551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2017408 |
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| End bp | 2020227 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122368 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_737760 |
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| Protein GI | 114047210 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.799991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCTC ACTTAAGTGG TGCAAATTCG
ACCTACGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CACAGTCAGT CTCTGACGAT
TGGCGTGCGG TATTTGATAA TCTCCCTCCG GTGAACGGTG CCTCTAAAGA CGCGCCTGAA
GCGGCTCACT CCAAAGTACG TGATTATTTT CGCAGTTTAG CGATGGAAGG GCGTCATAAG
AGCACAGCTC GTGTGACCGA TCCTGAGTTG GATGCTAAGC AAGTTAAAGT GCTACAGCTG
ATCAACGCCC ACCGTTTCCG TGGTCACCAA GGGGCTAACC TCGACCCGTT AGAATTGTGG
AAACGTGAAC CTGTTGCCGA TTTAGATCCC GCATTCCACG GTCTGACCAA AGAAGACATG
GAACGTGAGT TCAACACTGG CTCGTTCGCC CACGGCGGCG AAACCATGAA GCTGGCTGAC
TTAGTCAAAG CGCTAAAAGC CACTTACTGT GGTTCGATTG GCGCCGAATA CATGCACATT
ACCGATACCG ATGAGAAGCG TTGGATCCAA CAACGTCTTG AACCATCTTT AGGTAAAGCC
AACTACGATA AAAGCGTTAA GACCCGCATT CTCGAAGGCC TAAATGCCGC TGAAGGCATT
GAAAAATATT TAGGCGCTAA ATTCCCAGGT GCAAAACGCT TCTCGTTAGA AGGCGGCGAT
GCGTTAGTCC CTATGATGCG CGAAATCATT TACCGCGCAG GTGAAGCGGG CACAAAAGAA
ATCGTAGTCG GTATGGCTCA CCGTGGTCGT TTAAACGTAC TGGTGAACGT GTTAGGTAAG
CGTCCAGCTG AACTGTTTGA CGAGTTCGCC GGTAAGCACG CCGATACCCA CGGTTCAGGC
GACGTAAAAT ATCACCAAGG TTTCTCTTCT GATTTCGAAA CGCCGGGCGG CAACGTGCAC
TTAGCACTGG CCTTTAACCC ATCACACCTC GAAATCGTTA ACCCTGTGGT TATGGGCTCT
GTACGTGCTC GTCAAGACCG CCGTGGTTGT AAAGACGGTT TACAGGTGAT GCCAATCACG
ATTCACGGTG ACTCTGCAAT TGCTGGTCAA GGTATCGTGC AAGAGACATT CAACATGTCT
CAAACCCGTG GCTTTAAAGT GGGCGGCAGC ATCCGTATCG TTGTGAACAA CCAAGTTGGT
TTTACAACGT CAAACCACTT TGATGTGCGT TCAACTGAAT ACTGTACTGA CATCGCTAAG
ATGGTTCAGG CACCGATTTT CCACGTGAAC TCTGACGATC CAGAAGCCGT TGCCTTTGTT
GCTCAGCTTG CTGTTGATTA TCGTAACGAG TTTAAACGTG ACGTGGTGAT TGATTTAGTG
TGTTACCGCC GTCATGGCCA CAACGAAGCT GATGAGCCAA GTGCAACTCA GCCACTGATG
TATGCCAAGA TCAAGAAACA CCCTACGCCA CGTAAGATCT ATGCTGACAA ACTGATCGCC
GAAAACGCTA TCGGCGCTGA TGAAGTGACC AGCATGATCA ACACCTACCG CGACGCCTTA
GATCAAGGCG ACTGCGTAGT GAAAGAATGG CGCCCAATGA CACTGCACAC AGTGGATTGG
AGTCCGTATA TTGGACGTGA GTGGGACGAA GCGTATCAAG CCTCTATGCC ACTGGCGCGC
TTACAGAATC TAGCTGACAA ACTGAGCTAC GTACCAGAGA GTCACCCGCT GCATTCACGC
GTTGCTAAAA TTTATGGCGA TCGCGTTGCC ATGGCAAAGG GCGAGAAGCT ACTCGACTGG
GGCTTTGCTG AAACTTTAGC TTACGCCACG ATTCTTGAAG ATAAGCAACG TGTTCGCATT
ACAGGTCAAG ACTCTGGCCG TGGTACTTTC TTCCACCGTC ACGCGGTTCT GCACAACCAA
AACGATGCGA CAACATACTT ACCACTGCGT AACTTGTCTG AAGACCAAGG TCCAATCGAC
ATTACTGACT CAGTATTGTC TGAAGCATCA GTACTCGCCT TCGAATACGG TTATGCGACG
GCGGAACCTG GTGGTCTGGC GATTTGGGAA GCCCAATTCG GTGACTTTGC TAACTGTGCG
CAAGTGGTTA TCGACCAGTT CTTGTCTTCT GGTGAGCAAA AGTGGGGCCG TCTGTGCGGT
CTGACTATGC TGTTACCACA CGGTTACGAA GGTCAAGGTC CAGAACACTC AAGCGCCCGT
TTAGAGCGTT TCTTGCAGAT GTGTGCTAAC CACAACATGC AAGTTTGTGT GCCATCAACG
CCAGCACAGG TTTACCATAT GCTGCGTCGC CAAGTGGTTC GCCCAATGCG TCGTCCACTG
GTAGTGATGT CACCTAAATC ATTGCTACGT CACCCGCTAG CGGTTTCTAG CATGGAAGAA
TTGGCTAATG GCACCTTCCA AAACGTGATT GGTGAAATCG ATACGTTAGA AGCGAGCAAG
GTCGATCGCG TCGTGTTCTG TAGCGGTAAG GTATACTTCG AGCTGCTGGA AAAACGCCGT
AAAGAAAACA TCAATAACAT CGCAATAATC CGTGTCGAAC AGTTATATCC GTTCCCACAT
GAAGAAATGG TAGCAGCCTT AGCTGACTAT CAACATGTGA AGGATTTTGT ATGGTGTCAG
GAAGAGCCGC AAAACCAGGG TGCTTGGTAC TCTAGCCAAC ATCATTTCTG GGCAGCTATC
CCTGCGGGAG CAAAACTGAC CTACGCTGGC CGTGAAGCTT CTGCTGCACC AGCCTGTGGT
TACCCAGAGC TGCATGCTCA CCAACAAGAA TCTTTAGTGA ACAGTGCCCT AAAGCTGTAA
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| Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVSDD WRAVFDNLPP VNGASKDAPE
AAHSKVRDYF RSLAMEGRHK STARVTDPEL DAKQVKVLQL INAHRFRGHQ GANLDPLELW
KREPVADLDP AFHGLTKEDM EREFNTGSFA HGGETMKLAD LVKALKATYC GSIGAEYMHI
TDTDEKRWIQ QRLEPSLGKA NYDKSVKTRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHADTHGSG
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVMGS VRARQDRRGC KDGLQVMPIT
IHGDSAIAGQ GIVQETFNMS QTRGFKVGGS IRIVVNNQVG FTTSNHFDVR STEYCTDIAK
MVQAPIFHVN SDDPEAVAFV AQLAVDYRNE FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YAKIKKHPTP RKIYADKLIA ENAIGADEVT SMINTYRDAL DQGDCVVKEW RPMTLHTVDW
SPYIGREWDE AYQASMPLAR LQNLADKLSY VPESHPLHSR VAKIYGDRVA MAKGEKLLDW
GFAETLAYAT ILEDKQRVRI TGQDSGRGTF FHRHAVLHNQ NDATTYLPLR NLSEDQGPID
ITDSVLSEAS VLAFEYGYAT AEPGGLAIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQMCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL
VVMSPKSLLR HPLAVSSMEE LANGTFQNVI GEIDTLEASK VDRVVFCSGK VYFELLEKRR
KENINNIAII RVEQLYPFPH EEMVAALADY QHVKDFVWCQ EEPQNQGAWY SSQHHFWAAI
PAGAKLTYAG REASAAPACG YPELHAHQQE SLVNSALKL
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