Gene Shewmr7_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1707 
Symbol 
ID4255266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2014361 
End bp2014708 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID638122365 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_737757 
Protein GI114047207 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00251009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCA ATGCAGCAAG TTTTGGACGC AGTGGTGTTC ATGACTTTAT TCTACTACGC 
GCTAGTGCAG TAATCCTCGC CTGTTATACC ATTTTCATGG TTGGCTTTAT TGCATGTAGT
TCCCCTCTCA CCTATGACGT GTGGCACGGC CTGTTCAGCG CTCTGCCAAT GAAAGTGTTT
ACACTGCTCG CGTTAGTTGC ACTGCTTATT CACGCTTGGA TTGGTGTATG GCAAGTATTG
ACGGATTACG TCAAGTGCAC TTCGTTACGT GGTGTTTTAC AGTTCACCTT CGTCGTCACC
GTCTTTTGCT ATCTGGCGGC CGGCATTGTT ATTGTGTGGG GTGTCTAA
 
Protein sequence
MVTNAASFGR SGVHDFILLR ASAVILACYT IFMVGFIACS SPLTYDVWHG LFSALPMKVF 
TLLALVALLI HAWIGVWQVL TDYVKCTSLR GVLQFTFVVT VFCYLAAGIV IVWGV