| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1705 |
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| Symbol | gltA |
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| ID | 4255264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2012269 |
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| End bp | 2013555 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122363 |
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| Product | type II citrate synthase |
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| Protein accession | YP_737755 |
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| Protein GI | 114047205 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00232802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATT TAAAAGCCAA ATTAGAATTA CCAGGGAACG ACTCGATAGA ATTGCCAGTA
AAGCAAGGAT CCGCTGGTTT TGACGTAATC GATATCAGTA AACTTGGCAG CAAGGGTTAC
TTCACTTTTG ATCCAGGTTT TCTCGCGACA GCCTCCTGTG AATCTGCAAT TACCTATATC
GATGGCGATC AAGGTATATT GTTACACCGC GGCTATCCAA TCGAGCAACT CGCCGTTGAT
TCAGATTACT TAGACCTGTG TTATCTGCTG CTTTACGGTG AACTGCCGAC GAAAGAGCAA
TATACTGAAT TTGTACACAC AGTAAAAACC CACACTATGG TTCATGAGCA ACTCGCCTTC
TTCTTTAGAG GTTTCCGTCG TGATGCTCAT CCTATGGCGA TGTTGTGTGG TGTCACTGGT
GCATTGTCCG CATTTTATCA AGACTCACTC GATGTCAACG ATCCTCGCCA CCGCGAAATC
GCCGCGTATC GCCTAGTCTC CAAAATGCCA ACGATTGCCG CTATGTGCTA CAAGTACTCT
TCTGGCCAGC CATTCGTTTA CCCACGCAAT GACTTAAGCT ACGCAGGCAA CTTCTTAAGC
ATGATGTTTG CCGTTCCTTG TGAAGAGTAC AAGGTGAACC CAATCGTTGA ACGTGCTATG
GACCGTATCT TCATTTTACA TGCGGATCAC GAACAAAACG CGTCAACGTC AACCGTGCGT
TTAGCCGGTT CTTCAGGCGC GAATCCATTC GCGTGTATCG CGGCGGGTAT TGCTTCTCTA
TGGGGCCCTG CACACGGCGG CGCGAACGAA GCTTGTCTAC AAATGTTAGA AGAAATCGGT
TCAGTGGACC GTATTCCTGA ATTCATCGCC CGTGCGAAAG ACAAGAACGA CCCATTCCGT
CTGATGGGCT TCGGACACCG TGTTTACAAA AACTTTGACC CACGTGCCAA AGTGATGCGT
GAAACCTGTC ACGAAGTGTT AAAAGAACTG AAAGTACAAG ATCCATTATT AGATGTTGCG
ATGGAACTTG AGCGTATCGC ACTGGAAGAC GAGTACTTCA TTTCGAAGAA ACTCTATCCA
AACGTCGATT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCAAC CAGCATGTTC
ACAGTACTGT TTGCATTAGC ACGTACCGTG GGTTGGATTG CTCACTGGAA AGAAATGTTG
GATCAACCAG GTCACAAGAT CAGCCGTCCA CGTCAGCTAT ATACTGGCGA GACTGCGCGT
GACTTCGTTA GCCAAGATAA ACGCTAA
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| Protein sequence | MADLKAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI
DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKEQ YTEFVHTVKT HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS
SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIA RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGETAR
DFVSQDKR
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