Gene Shewmr7_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1703 
Symbol 
ID4255262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2007558 
End bp2010821 
Gene Length3264 bp 
Protein Length1087 aa 
Translation table11 
GC content50% 
IMG OID638122361 
Productacriflavin resistance protein 
Protein accessionYP_737753 
Protein GI114047203 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCA TCAGCACCTC AGTTAAGCGG CCAGTCACGG TATGGATGTT CATGCTGGCC 
ATTATGTTAT TCGGTATGGT GGGGTTTTCG CGCTTAGCAG TAAAACTCCT ACCCGATTTA
AGCTACCCCA CCTTGACCAT TAGAACCTTG TACGACGGTG CCGCGCCCGT TGAAGTAGAG
CAACTGGTTT CAAAACCCAT TGAAGAAGCC GTCGGTGTAG TGAAAGGCTT GCGTAAGATA
AGCTCAATCT CCCGCTCTGG CATGTCCGAT GTGGTACTCG AGTTTGAATG GGGTACCACT
ATGGATATGG CGAGCCTCGA TGTGCGTGAA AAACTCGACA CTATCGCCCT GCCACTGGAT
GTTAAAAAGC CATTATTGCT GCGCTTTAAC CCTAATCTAG ACCCAATCAT GCGCCTCGCG
CTGTCGGTAC CTAATGCATC AGAGGCCGAG CTTAAGCAGA TGCGTACCTA TGCAGAGGAA
GAACTTAAAC GCCGTTTAGA AGCCCTTTCA GGTGTAGCTG CGGTGCGTTT ATCCGGTGGT
TTAGAGCAGG AAGTGCATAT TCAGCTCAAT CAGGAAAAAT TATCCCAGCT CAATTTGAAT
GCCGACGACA TTAAACGCCG CATCTACGAG GAAAACATCA ACTTATCTGC GGGTAAAGTG
ATCCAAGGCG ACCGCGAATA TCTGGTTCGT ACCCTTAACC AATTCAATTC ATTGGAAGAG
CTGGGGCAAG TCATCGTCTA TCGCGATGCA CAAACCTTAG TACGTCTATT TGAAGTTGCG
ACCATTACCG ATGCCTTTAA AGAGCGTAGC GATATCACCC GTATTGGCAG CCAAGAGTCG
ATTGAACTGG CTATTTATAA GGAAGGCGAT GCCAACACGG TCGCGGTGGC TAAAAAGCTG
CGCGATGAGC TAGTCAAAAT CAACCAAGAT CCTAAGCAAA ACAAACTGGA AGTGATTTAC
GACCAGTCTG AGTTTATTGA GAGTGCCGTT AGCGAAGTCA CCTCATCCGC GCTGATGGGC
AGTATTTTGT CTATGTTGGT GATTTACCTG TTCCTGCGCA ATATTATCCC GACGCTGATC
ATCTCAATCT CCATCCCCTT CTCGGTGATT GCTACTTTTA ACATGATGTA TTTTGCCGAT
ATCAGCTTAA ACATCATGTC ATTAGGCGGT ATTGCGCTCG CTATCGGTCT CTTGGTCGAC
AATGCCATTG TGGTGCTGGA GAACATCGAC CGCTGCCGTA GCGAAGGCAT GAGCAAGTTA
GATGCGGCTG TCACAGGGAC TAAAGAAGTG GCGGGGGCGA TTTTCGCCTC GACCATGACC
ACGCTTGCAG TGTTTGTCCC CTTGGTATTT GTCGATGGTA TTGCGGGCGC CCTATTCTCT
GATCAAGCCC TCACAGTGAC CTTTGCTCTA CTCGCATCAC TCTTGGTGGC ACTAACCTCA
ATTCCAATGT TGGCTTCCCG CGAAGGCTTT ACAGCACTGC CCGAACTCAT CAAGAAAACC
CCGAAGGAGA AACCCACAAC TAAGCTCGGT AAGTTAAAAC ACTATAGTGC GACGGTATTT
TCCTTCCCGA TTGTGTTGCT CTTTAGCTAC ATACCGAGTG CATTGCTGAC TTTAGCGTTA
GTCATTGGCC GTTTCTTCTC TTGGCTGCTT GGGTTAGTGA TGCGCCCGCT CAGCAGTGGT
TTTAACTTTG TTTACCACGT TATCGAGTCG GTTTATCACA AACTATTAGC AATGGCGCTG
CGTAAACAAG TCGCCACTTT GTTACTGACC ATAGGGATCA CTGGCGCCTG TATTAGCTTG
CTCCCCCGCC TTGGCATGGA ACTCATCCCA CCGATGAACC AAGGGGAGTT TTATGTGGAG
ATCCTGCTGC CTCCTGGCAC TGCGGTCGGT GAAACCGATA AAGTACTGCA ACAACTCGCG
ATGTCGATTA AAGATAGACC CGAAGTCAAA CATGCCTACA GCCAAGCGGG CAGCGGCGGT
CTAATGACCT CAGATACCGC CAGAGGCGGT GAAAACTGGG GGCGTTTACA GGTCGTACTG
AGCGATCACA CGGCTTACCA TCAGGTAACA CAAGTGCTCC GTGACACTGC GCGCCGCATC
CCAGAGCTGG AAGCTAAAAT CGAGCAACCT GAACTCTTTA GCTTTAAAAC CCCATTGGAG
ATTGAGCTTT CGGGTTACGA TTTACACTTG CTTAAGCACA GTGCCGATAA TCTGGTTAAG
GCGCTTTCCG CCTCCGATCG CTTTGCCGAT GTGAATACCA GCCTGCGTGA TGGTCAGCCA
GAACTCAGCA TTCGCTTCGA CCATGCCCGC TTAGCCGCCT TAGGCATGGA TGCACCCACA
GTCGCCAATC GTATTGCCCA GCGCGTTGGC GGTACAGTCG CCAGCCAATA CACAGTCCGC
GACCGCAAAA TTGATATTTT AGTGCGTAGT GAACTGGATG AGCGGGATCA AATCAGTGAT
ATCGATGCAC TCATCATCAA CCCGAACAGC CAGCAACCGA TTGCCCTAAG CGCCGTGGCC
GAAGTGTCAT TGCAATTAGG CCCATCGGCG ATTAACCGCA TCAGCCAACA ACGAGTGGCC
TTAGTATCGG CCAACCTTGC CTATGGCGAC TTAAGTGATG CGGTGGCCGA AGCACAGCAA
ATTTTGTCTG CACAGGTGTT GCCCGCCTCG GTTCAAGCAC GCTTTGGTGG ACAAAACGAG
GAAATGGAGC ATTCATTCCA ATCACTGAAG ATTGCGCTGA TCCTGGCGGT TTTCCTGGTG
TACTTAGTGA TGGCGAGTCA ATTTGAATCA CTGCTGCATC CGCTGCTGAT TTTATTCGCC
GTGCCAATGG CGCTGGCAGG TAGCGTGCTT GGTCTTTATA TCACCCAAAC CCATTTGAGT
GTGGTGGTGT TTATTGGCCT TATCATGCTC GCGGGGATTG TGGTCAACAA CGCCATCGTA
CTGGTGGATA GAATTAATCA GCTGCGCACC GAAGGCGTGG ACAAGCTTGA GGCCATTAAG
GTCGCGGCCA AATCCCGTCT GCGCCCGATT ATGATGACCA CCTTAACCAC CACCTTAGGT
CTGCTGCCGA TGGCGTTAGG TTTAGGCGAT GGCTCAGAAG TCCGCGCACC GATGGCGATT
ACCGTGATCT TTGGTCTGAG TCTCTCGACC CTGTTAACCC TGATTGTTAT CCCTGTGCTC
TATGCCCTGT TTGACCGTAA AAAGTTTGAA CATACCGCCA CAGCGCAAGA CAACACGGCA
GAAACCGCGG AGGCTCGCCT ATGA
 
Protein sequence
MSIISTSVKR PVTVWMFMLA IMLFGMVGFS RLAVKLLPDL SYPTLTIRTL YDGAAPVEVE 
QLVSKPIEEA VGVVKGLRKI SSISRSGMSD VVLEFEWGTT MDMASLDVRE KLDTIALPLD
VKKPLLLRFN PNLDPIMRLA LSVPNASEAE LKQMRTYAEE ELKRRLEALS GVAAVRLSGG
LEQEVHIQLN QEKLSQLNLN ADDIKRRIYE ENINLSAGKV IQGDREYLVR TLNQFNSLEE
LGQVIVYRDA QTLVRLFEVA TITDAFKERS DITRIGSQES IELAIYKEGD ANTVAVAKKL
RDELVKINQD PKQNKLEVIY DQSEFIESAV SEVTSSALMG SILSMLVIYL FLRNIIPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAIGLLVD NAIVVLENID RCRSEGMSKL
DAAVTGTKEV AGAIFASTMT TLAVFVPLVF VDGIAGALFS DQALTVTFAL LASLLVALTS
IPMLASREGF TALPELIKKT PKEKPTTKLG KLKHYSATVF SFPIVLLFSY IPSALLTLAL
VIGRFFSWLL GLVMRPLSSG FNFVYHVIES VYHKLLAMAL RKQVATLLLT IGITGACISL
LPRLGMELIP PMNQGEFYVE ILLPPGTAVG ETDKVLQQLA MSIKDRPEVK HAYSQAGSGG
LMTSDTARGG ENWGRLQVVL SDHTAYHQVT QVLRDTARRI PELEAKIEQP ELFSFKTPLE
IELSGYDLHL LKHSADNLVK ALSASDRFAD VNTSLRDGQP ELSIRFDHAR LAALGMDAPT
VANRIAQRVG GTVASQYTVR DRKIDILVRS ELDERDQISD IDALIINPNS QQPIALSAVA
EVSLQLGPSA INRISQQRVA LVSANLAYGD LSDAVAEAQQ ILSAQVLPAS VQARFGGQNE
EMEHSFQSLK IALILAVFLV YLVMASQFES LLHPLLILFA VPMALAGSVL GLYITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRT EGVDKLEAIK VAAKSRLRPI MMTTLTTTLG
LLPMALGLGD GSEVRAPMAI TVIFGLSLST LLTLIVIPVL YALFDRKKFE HTATAQDNTA
ETAEARL