| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1698 |
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| Symbol | |
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| ID | 4255257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2000817 |
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| End bp | 2002370 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122356 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_737748 |
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| Protein GI | 114047198 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CCAAATTCGT TGAAGGTTCG ATTCTTCGTC ATATCCTCGT GATGAGTTCG
ACCGCCGCCG TGGGGATTTC TGCCTTATTT GTGGTCGATT TACTCGATAT TTTCTTCTTA
AGTTTACTCG GCGAACATGA ACTGGCCGCG GCGGTGGGCT ATGCGGGCAG TATTTCGTTT
TTTACGACCT CTATCGGTAT CGGCCTGTCG ATTGCGCTTG GCGCGTTAGT TTCCCGCTCG
ATTGGTGCAA AGGATGTCGA GTTAGCTAAA CGCCTCTTGC TCAATAGTGC GGCAGTGACC
ACCTTAATCA GCCTTTTTGT GAGTGTGGTG GTGACCTGTT TTATCCCCGA ATTAGTGACT
TTGGTAGGGG CGAGCGGCCA TACTGCGGAA CTTGCCGAGA GTTATCTGTA CATTTTGGTG
CCTTCTTTAC CCTTTATTTG CCTTGCGATG GCCCTTGGCG GTGCGCTGCG TGCCGTTGGG
GATGCCAAAC TGTCGATGAT GTCTACCTTA GCGGGTGGCG GCGTTAATGC GGTGCTGGAT
CCGATTTTTA TTTTTCTGTT TGCCATGGGG ATTGAAGGTG CGGCACTGGC GTCGGTCCTT
GCCCGTATTG CGGTCTTTAT CATTGCCGGG CGTGGTGTGG TGGTAAAACA TCAACTGCTA
GGTAAGTTTA ACTTCAGCTA TTTTGTTGCC GATCTCAAAC CGATTTTCGC CATTGCCGGG
CCTGCTATGC TGACGAATAT CGCTACGCCC ATTGGTAACG CCTTTGTGAC CCGCGCGATT
GCGGATTTTG GTGATGCCTA TGTTGCCGGT TGGGCGGTGC TGGGAAGGTT AGTCCCGGTC
ACCTTTGGGA TGATTTTTGC GTTATCCGGC GCCATTGGGC CGATTGTTGG GCAAAACTTT
GGGGCGGGCC GATTCGACCG GGTGCGCGAG AGTTTAACCA AGGCGATCCA ATTTTGTACC
TTGTATGTGG TGGTGATGTC GCTGCTACTT TTCTTGCTCA AATCGCAGGT GGTGAGCCTA
TTCGATATGA AAGGCGATAG CGCGGCGCTT ATCGAGTTTT TCTGTAGCTA TATCGCGGTG
TTTTTTACCT TCTCTGGCAT TTTATTTGTG GCCAATGCTT CGTTTAATAA TCTGGGCAAA
GCCAAATATT CCACCCTGTT CAACGTGGGT AAAGCCACGT TAGGAACTGT GCCATTCGTG
TATTTTGGCG CGCAGTGGGG CGGGGTATAC GGTGTGTTAA TCGGCCAAGT ATTGGGCTCG
ATTCTGTTTG GGATAATGGG TGTATGGGTG GCTTACCGAT TAGTCGATCT GGCAAGCCGC
GCGAACGCAG CGCAGCCCTT GGGGAGCGAT ACCGAAGAGG CGCAGGCTAA ATGCCAACAA
CTGCTGGCGG GGGATGAGGA AGAAATTGCC AATTGTGTTG GCCAAAATCT GCCCTCATCT
ACGAGTCCGT TTTCATCCTC CCATGTGCAA ATGGGCCAAT TGACCGAAGA GCAGGAATGC
GAGGCGGTCG CTAACGCAGT GGATTTTGAT AAAGCGAAAC CTAATACGCC CTAA
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| Protein sequence | MTQAKFVEGS ILRHILVMSS TAAVGISALF VVDLLDIFFL SLLGEHELAA AVGYAGSISF
FTTSIGIGLS IALGALVSRS IGAKDVELAK RLLLNSAAVT TLISLFVSVV VTCFIPELVT
LVGASGHTAE LAESYLYILV PSLPFICLAM ALGGALRAVG DAKLSMMSTL AGGGVNAVLD
PIFIFLFAMG IEGAALASVL ARIAVFIIAG RGVVVKHQLL GKFNFSYFVA DLKPIFAIAG
PAMLTNIATP IGNAFVTRAI ADFGDAYVAG WAVLGRLVPV TFGMIFALSG AIGPIVGQNF
GAGRFDRVRE SLTKAIQFCT LYVVVMSLLL FLLKSQVVSL FDMKGDSAAL IEFFCSYIAV
FFTFSGILFV ANASFNNLGK AKYSTLFNVG KATLGTVPFV YFGAQWGGVY GVLIGQVLGS
ILFGIMGVWV AYRLVDLASR ANAAQPLGSD TEEAQAKCQQ LLAGDEEEIA NCVGQNLPSS
TSPFSSSHVQ MGQLTEEQEC EAVANAVDFD KAKPNTP
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