Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1681 |
Symbol | |
ID | 4256315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1982384 |
End bp | 1984609 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122340 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_737732 |
Protein GI | 114047182 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.642711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGATA ACTCACCAAC AATTATTTAT ACCGAAACCG ATGAAGCGCC AGCACTGGCA ACGCTTTCTC TGTTACCTAT CATCAAAACC TTTACCGATG CGGCGGGTGT TGCGGTTGAA ACCCGTGATA TTTCTTTATC GGGCCGTGTG ATTGCAAATT TCCCTGAAAA ACTGACTGAC GCGCAAAAAA TTGGCGATCA CTTAGCTGAG CTGGGCGAAT TAGCCAATCA ACCTGAAGCA AACATCATCA AACTGCCAAA CATCAGTGCC TCGATTCCGC AGTTAAAAGC CTGTATTTTA GAGCTGCAAC AGAAAGGTTA CGACATTCCA AATTATCCTG ACGAGCCAAA GACTGACGAA GAAAAGTCTA TCAAAGCCCG TTACGACAAG ATCAAAGGCA GTGCGGTAAA CCCAGTACTG CGTGAAGGTA ACTCTGATCG CCGTGCGCCG CTTTCAGTGA AAAACTTCGC CAAGAAAAAC CCGCACTCTA TGGGTAAATG GAGTAAAGAG TCACAATCTC ACGTTGCTCA CATGAGCGAA GGTGACTTCT ACGGTAGCGA GCAGTCTGTG ACTCTGGCTA ACGCCGACAC AGTTAACATC GTATTGTCTC AAAAAGACGG TCAAGAAGTG GTGTTGAAGT CAGGCCTGAA ACTGCTAGCT GGTGAGATCA TCGACGCGTC AGTGATGAGC AAAAAAGCCT TAGTCAGCTT CTTTGAGCGT GAAATCGCTA ATGCCAAGGC TGAAAACGTG TTGTTATCAC TGCACCTTAA AGCCACCATG ATGAAAGTGT CCGATCCCAT CATGTTTGGC CACGCGGTGA AAGTGTTCTT CAAACCTGTG TTTGATAAAC ATGCGTCATT ATTTGCTGAG TTAGGTGTAG ACGTAAACAA TGGCTTTGGC GATGTTTACG CGAAAATCGC CAGCTTACCA GCCGATGTCC GTGCACAAAT CGAAGCGGAT ATCGCCGCCG TTTATGCTGA GCGCCCAGCG CTGGCGATGG TAGATTCTGA TAAAGGTATC ACTAACTTAC ACGTACCAAG CGACATCATT ATCGATGCGT CTATGCCTGC GGCGATTCGT TCATCTGGCC AAATGTGGGG CCCTGATGGC AAGTTGCACG ACACTAAAGC GCTGATCCCA GACCGTTGCT ACGCGGGTGT GTATCAAGAA ACTATCGCTT TCTGTAAAGA GCACGGTGCT TTCGATCCAA GCACAATGGG CAGTGTGCCA AACGTTGGTC TGATGGCTCA AAAAGCCGAA GAATATGGTA GCCACGATAA AACCTTCGAA ATCCCAGCTG ATGGCGTAGT TAACGTGATT GATGCCAGTG GCAAAGTGTT AATGAGCCAC AACGTTGAAG CGGGCGATAT TTGGAGAATG TGCCAAGTTA AAGATGCGCC AATTCGCGAC TGGGTGAAAT TAGCTGTACG CCGTGCACGC TTAAGCAATA CTCCTGCGGT ATTCTGGTTA GATGCGAATC GTGCCCACGA TGCGCAGCTG ATTGCTAAAG TGAAGCAATA TCTGCCTGAG CATGATACAA GCGGTTTAGA AATCAGCATC ATGTCACCAG AAGAAGCGAC TCGTTTCTCA TTAGTGCGTA TTAAAGAAGG TAAAGATACT ATTTCTGTTA CCGGTAACGT ACTGCGTGAC TACCTGACTG ACTTATTCCC AATTCTCGAA CTGGGTACCA GTGCTAAGAT GCTGTCTATC GTGCCATTAA TGAATGGTGG CGGCCTGTTC GAAACGGGTG CGGGCGGTAG TGCGCCTAAA CACGTACAAC AGGTTGAAAA AGAAGGTCAC TTACGTTGGG ACTCTCTGGG TGAATTCCTG GCTTTAGCGG CTTCTTTAGA GCATTTAAGC CAAACAGTGG GTAACCCTAA GGCACAAGTA CTGGCGGATA CTTTAGATCA AGCCATCGGT CAGTTCTTAG ATAGCAACAA GTCGCCATCA AGACGCGTTG GTGAACTAGA TAACCGTGGT AGCCATTTCT ATCTGGCGAT GTACTGGGCA CAAGCATTAG CTGCGCAAAC CAAAGATGAG CAGTTACAAG CTCACTTTAT TCCACTGGCG CACGCACTAG CTGCCAATGA GCAAGTAATT GTTGCTGAGT TAAACAATGC GCAAGGTGCA CCAGTGGATT TAGGCGGTTA CTACCGTTTA GATGCTGCAA AAGCTGAAAA AGCCATGCGC CCAAGTGAAA CACTGAACAA GTTATTAATT GCTTAA
|
Protein sequence | MKDNSPTIIY TETDEAPALA TLSLLPIIKT FTDAAGVAVE TRDISLSGRV IANFPEKLTD AQKIGDHLAE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP NYPDEPKTDE EKSIKARYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWSKE SQSHVAHMSE GDFYGSEQSV TLANADTVNI VLSQKDGQEV VLKSGLKLLA GEIIDASVMS KKALVSFFER EIANAKAENV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHASLFAE LGVDVNNGFG DVYAKIASLP ADVRAQIEAD IAAVYAERPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR SSGQMWGPDG KLHDTKALIP DRCYAGVYQE TIAFCKEHGA FDPSTMGSVP NVGLMAQKAE EYGSHDKTFE IPADGVVNVI DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DANRAHDAQL IAKVKQYLPE HDTSGLEISI MSPEEATRFS LVRIKEGKDT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG SHFYLAMYWA QALAAQTKDE QLQAHFIPLA HALAANEQVI VAELNNAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
|
| |