Gene Shewmr7_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1679 
Symbol 
ID4256313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1980677 
End bp1981168 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content49% 
IMG OID638122338 
ProductNUDIX hydrolase 
Protein accessionYP_737730 
Protein GI114047180 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.164244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.63188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAA AACTCAGATA CAAACCCAAT GTGACTGTGG CCTGTATTAT CCACGCGCCT 
ACCGAAGATA TGTATCTGTT AGTGGAAGAG TGGATTGATG ACGAGCAGCG CTTTAACCAG
CCCGCCGGAC ATTTAGAAGC GAATGAGAGT TTGATCCAAG CCTGTAAACG TGAAGTGCTC
GAAGAAACCG GGCTGAATCT TGAGCCTCAA GGCTTAGTGG GGATTTATCA GTTTAGTGCC
AGTGAAGCAC TCGCTTTTGT GCGCTTTACT TTTTTCGTAC AAGTCGATGC GCTGCTCCCC
CCTCAGCCAC AGGATGCAGA TATTGATGCC GCCCATTGGC TGAGCTTTGA GCAAATCGAA
GCCAAAATGG AGCAGCTTCG TAGCCCATTG GTGCTCGATT GCCTTAGGGA TTACCGCCAT
CAGCAGCAAC AGGGGCAAAC CTACTCCCTC GAATTACTCA ATAGTCAGCG TCTAACGGGA
TGTCAAAGAT AG
 
Protein sequence
MAEKLRYKPN VTVACIIHAP TEDMYLLVEE WIDDEQRFNQ PAGHLEANES LIQACKREVL 
EETGLNLEPQ GLVGIYQFSA SEALAFVRFT FFVQVDALLP PQPQDADIDA AHWLSFEQIE
AKMEQLRSPL VLDCLRDYRH QQQQGQTYSL ELLNSQRLTG CQR