Gene Shewmr7_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1669 
Symbol 
ID4255089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1968439 
End bp1968930 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID638122328 
Producthypothetical protein 
Protein accessionYP_737720 
Protein GI114047170 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00525442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAGC ACACAGAGAA TGTCATCGAC ACGCTACAGG AATTCACCAA TAAGCCAAGG 
TCGAATGAAG TCTTAACACG GCCAACTGAG CTGTGTAGTG AAGTACCGCT ATTTCATATC
CAGTTATCCG GTGACTGGCT ATATCAAGGC AGCCCATTAC CGACGAAGTT TGCCAAGTTA
TTTGCCAGTA TTTTGCATGA CATCGATGGT GAGCATTTTC TCATTACGCC AGTCGAGAAG
GTACGTCTCG AGGTGGAAGA TGCGCCGCTG GTGATTGTCG ATTATCTAAA GAATGAGACT
GCACCGGGTT TTATGCTGAA AACCAGTATT GGAACTGAGC ACCATATTGC CGACTTCAAT
CGACTAAGAC TGACCGACTT TGGGATTTAT CTGCCCCTAG AACGTGGTCT ATGGGGAAAA
TTAAGTCGCG CTTGCTACTA CAATTTTGTG AATGAATTCA ATTTATCCGA CGCAGAGGGA
CTCGGCGCTT AA
 
Protein sequence
MEKHTENVID TLQEFTNKPR SNEVLTRPTE LCSEVPLFHI QLSGDWLYQG SPLPTKFAKL 
FASILHDIDG EHFLITPVEK VRLEVEDAPL VIVDYLKNET APGFMLKTSI GTEHHIADFN
RLRLTDFGIY LPLERGLWGK LSRACYYNFV NEFNLSDAEG LGA