Gene Shewmr7_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1666 
Symbol 
ID4255087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1961899 
End bp1962711 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID638122326 
Producthypothetical protein 
Protein accessionYP_737718 
Protein GI114047168 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00389139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000164023 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACCAA AGGTATTTTA CATCTCCGAC GGGACAGCGA TCACAGCTGA GGTTTTTGGG 
CATGCAGTAC TCTCGCAATT TCCATTAGAA TTTGAGTCAC TTACAATTCC ATTTGTTGAA
ACATTGGCAA AAGCAGAGAA CGTTAAACGA CAAATTAATG ATTGTTTTAT TACAACAGGT
GAACGGCCGT TAGTGTTCCA TTCGATCGTC AAACCTGAAA TTCGGGACAT TATTTATTCG
AGTGAAGGGC TCGATTACGA TTTTTTAAAT ACCTTCGTTG CACCACTTGA ACAACATTTA
GGCGTTAGCG CCTCTCCGGT GTTACATCGC ACCCACGGAA AAGCCAATCA CGGCTACGAA
GCCCGTATCG ATGCCATCAA TTTTGCGATG GACAATGACG ATGGCCAAAC CATGAAACAT
ATGGATCAGG CCGATTTAAT CCTGCTTGGC GTGTCTCGCT GCGGTAAAAC CCCGTCCAGC
CTCTATTTAT CGATGCAGTT TGGTATTAAA GCGGCCAACT ATCCGTTCAC CGAAGACGAT
ATGGATAACC TGAAACTGCC CGAAGCGTTA AAACGCAATA AGAAAAAGTT GTTCGGCTTA
ACCATCGATC CGGTGCGCTT ACATGAAATC CGCCAAAGCC GCATGGAAAA CAGCCGCTAC
TCGTCCTTAA AACAGTGTCG TTTAGAGGTA AAAGAAGTTG AGATGATGTT TAAACGTGAA
CGTATTCCTT ATATCGACAC CACCAACCAC TCGGTCGAAG AAATCGCCAC TAAGATTTTG
GACGTGACAG GCTTAGAACG TCATATGTTC TAA
 
Protein sequence
MAPKVFYISD GTAITAEVFG HAVLSQFPLE FESLTIPFVE TLAKAENVKR QINDCFITTG 
ERPLVFHSIV KPEIRDIIYS SEGLDYDFLN TFVAPLEQHL GVSASPVLHR THGKANHGYE
ARIDAINFAM DNDDGQTMKH MDQADLILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEDD
MDNLKLPEAL KRNKKKLFGL TIDPVRLHEI RQSRMENSRY SSLKQCRLEV KEVEMMFKRE
RIPYIDTTNH SVEEIATKIL DVTGLERHMF