Gene Shewmr7_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1645 
Symbol 
ID4257358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1933985 
End bp1935259 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content47% 
IMG OID638122305 
Producthypothetical protein 
Protein accessionYP_737697 
Protein GI114047147 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00220119 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00165359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTATGG CGAACTTTAT CGATAGACGG TTGAATGCGA AAGGAAAAAG CACAGTCAAC 
CGCCAACGCT TTATCAACCG ATATAAGCAA CAAATCAAAA AAGCCGTCAG CGATGCCGTC
ACGCGTCGCA GTGTAACGGA TGTAGATAAA GGCGAAAAAA TCAGTATTCC CACACGGGAT
ATCAGTGAAC CTATGTTCCA TCAAGGCAAA GGAGGCGTAA GAGATAGAGT CCACCCAGGC
AATGATCAAT TCACCCGTGG CGATAAAATT GACAGACCCC AAGGTGGCGC TGGCGGCGGT
GCGGGTAAAG GCGATGCCTC GGATTCGGGC GAAGGCAATG ATGACTTTGT GTTTGAAATC
TCAAAGGATG AATACCTAGA GCTGCTCTTT GAGGATTTAG AACTGCCGAA TCTGCAAAAA
AACCGCTTAA ACAAGCTCGT CGAGTATCAA ATCTACCGCG CGGGCTTCAC CAATGATGGT
GTACCAGCCA ATATCAATAT TGTGCGCTCA CTGCGTTCCT CCTTGGCGCG CCGCATTGCC
ATGTCGGCAA GTAAAAAGAA ATTACTCAAA GAGTTAGAGC AAGAACTGGC GGAGCTTGAA
AATATTCCGG GCACTAAAGC CGAGCTGATT TTGGATTTAA AAGCCCAAAT CGAGGCGCTC
AAGCAGAAGA TTGCTAAAGT TCCCTTCATC GATACCTTTG ACTTACGTTT CAACAACTTT
GCAAGGCGCG AGGTGCCCTC AAGCCAAGCG GTCATGTTCT GCTTAATGGA CGTATCAGGC
TCGATGGATC AAGCAACAAA AGATATGGCG AAACGTTTCT ATATCTTGCT GTACTTGTTT
CTCACCCGAA CCTACAAAAA CCTCGAGGTG GTCTATATCC GCCACCATAC CCAAGCGAAG
GAAGTGGACG AACATGAGTT CTTCTACTCC CAAGAAACCG GCGGCACGAT TGTCTCAAGC
GCATTGAAAT TAATGCACGA AATTCAGCAG GCTCGCTACC CTGCCGATGA GTGGAATATC
TATGCCGCAC AAGCCTCTGA CGGTGATAAC TGGGCCGATG ACTCTCCCAC CTGTCGACAA
TTATTGGAGC AAAAAATCCT GCCGCTAGTG CGCTATTTTA GCTATATCGA AATCACCAAT
CGTGCGCACC AAACCCTATG GCGCGAATAC GAATCCCTAC AACAACACTA CGACAACATA
GCGGTGCAAC ATATTCGTCA AGCCGAAGAT ATCTACCCTG TATTTAGAGA ATTATTTAAA
AAGCAGGCGG TTTAA
 
Protein sequence
MRMANFIDRR LNAKGKSTVN RQRFINRYKQ QIKKAVSDAV TRRSVTDVDK GEKISIPTRD 
ISEPMFHQGK GGVRDRVHPG NDQFTRGDKI DRPQGGAGGG AGKGDASDSG EGNDDFVFEI
SKDEYLELLF EDLELPNLQK NRLNKLVEYQ IYRAGFTNDG VPANINIVRS LRSSLARRIA
MSASKKKLLK ELEQELAELE NIPGTKAELI LDLKAQIEAL KQKIAKVPFI DTFDLRFNNF
ARREVPSSQA VMFCLMDVSG SMDQATKDMA KRFYILLYLF LTRTYKNLEV VYIRHHTQAK
EVDEHEFFYS QETGGTIVSS ALKLMHEIQQ ARYPADEWNI YAAQASDGDN WADDSPTCRQ
LLEQKILPLV RYFSYIEITN RAHQTLWREY ESLQQHYDNI AVQHIRQAED IYPVFRELFK
KQAV