| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1634 |
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| Symbol | |
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| ID | 4257087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1921955 |
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| End bp | 1922593 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122294 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_737686 |
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| Protein GI | 114047136 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0379481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TCAGTGATAT TCGCCGTGAA TACACCAAAG GCGGCTTAAG ACGCGCCGAT
TTACCCCAAA ATCCCATGCA GCTATTCGAG TTATGGATGA CACAAGCTCG CGATGCCGAA
CTGAGCGACC CTACGGCGAT GTGTGTCGCT ACGGTGGACG AGCATGGTCA GCCCTATCAG
CGAATTGTGC TGTTAAAGCG CTTTGATGAC ACTGGCTTTG TATTCTTCAC TAACTTGGGC
AGTCGTAAGG CGCAGCAGAT CGCAGCCAAT AATAAGGTCA GTCTGCATTT CCCCTGGCAC
TCGATTGAGC GCCAAGTATC GATTCTCGGT GAGGCGCAGC CACTCTCTAC CGCTGAAGTG
CTGAAATACT TTATGACTCG TCCTAAGGAT AGCCAGATTG CGGCCTGGGT ATCACAGCAG
TCCAGTAAGC TGAGCGCGCG ACAAGTGCTC GAAGGTAAGT TCTTTGAAAT GAAAGCTAAA
TTTGCCAAGG GCGATGTGCC ATTACCGAGC TTTTGGGGCG GCTACTTAGT CAAGCCTTCC
AGTATCGAAT TTTGGCAGGG CGGGGAGCAC AGACTGCACG ATCGTTTCCT CTATACTCGC
CAAGCGGATG AATGGGTCAT TGACCGTTTA GCGCCTTAA
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| Protein sequence | MTDLSDIRRE YTKGGLRRAD LPQNPMQLFE LWMTQARDAE LSDPTAMCVA TVDEHGQPYQ
RIVLLKRFDD TGFVFFTNLG SRKAQQIAAN NKVSLHFPWH SIERQVSILG EAQPLSTAEV
LKYFMTRPKD SQIAAWVSQQ SSKLSARQVL EGKFFEMKAK FAKGDVPLPS FWGGYLVKPS
SIEFWQGGEH RLHDRFLYTR QADEWVIDRL AP
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