Gene Shewmr7_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1606 
Symbol 
ID4258704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1886569 
End bp1886853 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content43% 
IMG OID638122259 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_737661 
Protein GI114047111 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00300072 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.339336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACC ACTTTAGTGT GCTCGGTATC AAACCTAGCG CCAAAGAAGA CGACATTAAA 
AAAGCCTATC GCCGGCTCTC AAACAAATAC CATCCCGATA AGTTGTTAGG TGCCTCTGAT
GAAGAAAAAG AGCAAGCATC ACAACAACTT GAGCGCGTTA AAAAAGCTTA TGAAGTGCTC
TCAGATCCCA AGCTTAGAAA TGCGTTTATC CGAGACTTCA ACAATGTGAT CGTAACCGAT
CCCAATGGCG CCATGCGCGA ATTATGGGAT CAGTTTTACC CTTAA
 
Protein sequence
MINHFSVLGI KPSAKEDDIK KAYRRLSNKY HPDKLLGASD EEKEQASQQL ERVKKAYEVL 
SDPKLRNAFI RDFNNVIVTD PNGAMRELWD QFYP