Gene Shewmr7_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1600 
Symbol 
ID4258698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1879945 
End bp1880460 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID638122253 
Producthypothetical protein 
Protein accessionYP_737655 
Protein GI114047105 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.209415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG CGACCTTAGC ATTAAGCCGT TTCCATAAGC GCGCCTTAGT CTTAGTGGTG 
TTTACCGCTG CAGTACTGCT GATAAGCATC AACTGGCGAA TCGCTCAGAT TGAGCAGTTA
TTACAAGATG GCCAAGTGGT ACGTTTTGCC TTAGCGCCAG TGGATCCTCG CTCGATTATG
CAAGGGGATT ATATGGCCTT GGAGTATGCC ATTGCACAGG AGGTACGCGC CGCACTACCC
GAGGGGATGA CACAGGGGCA ACTGTTATTG ACGCTCGACG CGCAAAAGGT GGCGCACTTT
GTCGGTATTT ACCGTGACCA ACCAAAAACG GCTGAGCAGC TCACGGTAGA TTTTCGCCTG
CGTAATCATA GAGTAAAGCT CGCCTCAAAT AGTTTCTTCT TCGAAGAGGG TCAAGCCGAC
CACTTCAGCC AAGCAAAGTA TGGAGAATTC AGAGTCAGCG AATGGGGAGA GTTGTTGTTG
GTGAATCTGC TGGATGAGCA GTTGCAGCCG TTATAG
 
Protein sequence
MDKATLALSR FHKRALVLVV FTAAVLLISI NWRIAQIEQL LQDGQVVRFA LAPVDPRSIM 
QGDYMALEYA IAQEVRAALP EGMTQGQLLL TLDAQKVAHF VGIYRDQPKT AEQLTVDFRL
RNHRVKLASN SFFFEEGQAD HFSQAKYGEF RVSEWGELLL VNLLDEQLQP L