Gene Shewmr7_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1589 
Symbol 
ID4257674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1861081 
End bp1861632 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID638122237 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_737644 
Protein GI114047094 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00127718 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACAG TCAATCGAGC CGTATTTTTA GACCGTGATG GTGTGATCAA CAAAGATCAT 
GGTTATGTGC ATCAGGTGGA TGACTTTGAA TATATAGAAG GTGTGTTTGA AGCCTGCCTC
GCCTTAAAGC AAATGGGATA CAAATTGGTG GTGGTCACCA ATCAGTCGGG GATTGCCCGT
GGCATGTATA CTGAAGATCA ATTCCACAGT CTCACCGAAT GGATGGATTG GAACTTTGCC
GATAAAGGTG TTGACCTCGA TGGCATCTAT TATTGCCCGC ACCATAATGA AAAAGGTCTC
GGTGAATATA AAGTCGATTG CGATTGCCGC AAGCCAAAAC CTGGCATGTT ACTCGATGCG
GCAAAATTCC TGAAAATCGA TTTGTCGCAG TCGGTGATGG TGGGCGATAA AGCAGACGAT
ATGCTTGCGG CCAAAGCGGC AGGGGTCCCG ACGCGTATCC TCGTCCGTAC TGGTAAAGCA
ATCGCTGATG ATAGTGAGGC GTCTGTAGTG CTCGATAGCA TTGCCGATGT GCCGGGATTT
TTAAAGAAGT AG
 
Protein sequence
MGTVNRAVFL DRDGVINKDH GYVHQVDDFE YIEGVFEACL ALKQMGYKLV VVTNQSGIAR 
GMYTEDQFHS LTEWMDWNFA DKGVDLDGIY YCPHHNEKGL GEYKVDCDCR KPKPGMLLDA
AKFLKIDLSQ SVMVGDKADD MLAAKAAGVP TRILVRTGKA IADDSEASVV LDSIADVPGF
LKK