Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1587 |
Symbol | |
ID | 4257672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1858935 |
End bp | 1859999 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122235 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_737642 |
Protein GI | 114047092 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0151825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.180173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTACG CCACTATCAC TGGCTGGGGA AAATGCGTTC CTCCCGCCAC TTTGACTAAC GATGATCTTG CTACTTTTAT CGAAACTTCC GATGAATGGA TTAAAAGCCG TACCGGGATC AGCCAGCGTC ATATCAGCCA TGTGAATACC TCAGAATTAG CATCGGTTGC CGCTAAACGC GCCCTTGCCG CGGCAGGCAT TGACGGCAGC GAAATTGATA TGATCATTTT AGCCAGCGCC AGCCCAGATA CCTTGATCCC CAATATTGCC TCTACAGTAC AGGCCAATAT CGGCGCAAGC TGTGCAGCCT TCGATATCAA TGCGGCATGC AGTGGCTTCT TATACGGCTT AGGTTTAGCC AGCTCACAGA TCAAGAGTGG CCAGAGCAAG AAAGTATTGG TGATTGGTGC TGAACGTTTA TCATTCTATC TAGATTGGTC ACGCCGTGAA ACCGCAGTGC TGTTTGGTGA TGGTGCGGGT GCCGTCGTGG TTGAAGCGAC GGACGTTCCA GGCGGTGTAT TAGGCTATGA GCTGAATAAC GATCCTGAAG GTCGTGATAT CCTAAAAGCC GGTTTTGGTA CTGCGATGGA CAGATTCTCC GCCGAATCAT TAGACTTTTA TATTCAATTC GATGGCCAAG AAATCTTTAA ACGTGCCATT AATGGTATGA ATAAGTTAAG CACTCAAGTG CTTGAAAAAT GTGGCGTTGA TAAGGATGAA GTCGATTTAG TGATCCCACA CCAAGCGAAC GAGCGCATTA TCGATACCCT CGTTAGCCGC ATGAAGATCC CTAAAGAAAA AGCCTTCGTG AACATCGCTA ACTATGGCAA CACCTCAGCG GCCACTATCC CCATCGCCAT CTGCGATGCG TTGGAAAAAG GGTTAATTAA GCCGAACCAA ACCATTCTGT CCTGCGCCTT CGGTGCTGGG TTAACCTCAG CAGCGCTGCT ACTGCAGTGG GGCGAGCGCG TGACCCCTGT GCAGGTGAGT GATGCTCAGC TGCCACCCTG TGAGCTAAGT GGTATTGAGC TGGTGAAACG TGCTGTGGAT TATTTCTGTA AGTAA
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Protein sequence | MQYATITGWG KCVPPATLTN DDLATFIETS DEWIKSRTGI SQRHISHVNT SELASVAAKR ALAAAGIDGS EIDMIILASA SPDTLIPNIA STVQANIGAS CAAFDINAAC SGFLYGLGLA SSQIKSGQSK KVLVIGAERL SFYLDWSRRE TAVLFGDGAG AVVVEATDVP GGVLGYELNN DPEGRDILKA GFGTAMDRFS AESLDFYIQF DGQEIFKRAI NGMNKLSTQV LEKCGVDKDE VDLVIPHQAN ERIIDTLVSR MKIPKEKAFV NIANYGNTSA ATIPIAICDA LEKGLIKPNQ TILSCAFGAG LTSAALLLQW GERVTPVQVS DAQLPPCELS GIELVKRAVD YFCK
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