Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1581 |
Symbol | |
ID | 4254927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1851515 |
End bp | 1853251 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122229 |
Product | Na+/solute symporter |
Protein accession | YP_737636 |
Protein GI | 114047086 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.292931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0106381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTAC AAGGATTAAC TTATCTGATT GTGGGGCTGT CGTTCGCGCT CTACATTGGG ATCGCGATTT GGTCCCGTGC GGGCTCGACT AAAGAGTTCT ATGTGGCGGG TGGCGGTGTT CATCCGGTTG TTAACGGTAT GGCAACTGCG GCGGACTGGA TGTCAGCGGC ATCCTTTATT TCGTTGGCAG GGATTGTCTC CTTCGTCGGT TATGACGGCA GTGTGTACTT GATGGGTTGG ACCGGCGGTT ACGTTCTATT AGCCCTGTGT ATGGCACCAT ACTTACGTAA ATTTGGTAAG TTTACCGTGC CTGATTTCGT GGGTGAACGT TATTACTCCC AAGCGGCGCG TACGGTAGCG GTTATTTGCG CTATCTTCAT CTGCTTTACG TATATTGCAG GTCAGATGCG CGGTGTGGGC GTGGTGTTCT CTCGCTTCCT CGAAGTTGAG GTGGATACTG GCGTGTACAT CGGTATGGCC GTGGTGTTCT TCTATGCGGT ACTCGGTGGT ATGAAGGGTA TTACCTATAC TCAGGTGGCC CAGTACTGCG TGCTGATCTT CGCCTTTATG GTGCCTGCAA TCTTCCTATC TGTGATGATG ACGGGTCATA TCATTCCTCA AATTGGTTTC GGTGCTCAGT TAATCGATGC TGCTGGTAAT AACTCTGGCG TCTATCTGTT AGAGAAACTC AACAATCTAT CGGTAGATTT AGGCTTTGCG CCATACACCG ATGGCTCTAA GAGCATGATC GACGTGTTCT GTATTACCGG CGCTCTGATG GTTGGTACCG CAGGTTTACC CCATGTTATC GTGCGTTTCT TTACTGTACC TAAAGTGAAA GATGCGCGTA TCTCTGCTGG CTGGGCACTG GTGTTTATCG CCATCATGTA CACCACTGTA CCTGCATTAG CGGCCTTCTC CCGTGTAAAT ATGATTGAGA CCATTAACGG TCCAGATCAA AAGGGTGTTG CCTATGAAAC TGCGCCTGAT TGGATCAAAA ACTGGGAAAA AACTGGCCTG ATCAAATGGG ATGACAAGAA TGGCGACGGC AAAATCTATT ACGCAAAAGG CAAAATGGAA GATGCTGCTA GCCCTAACGA AATGAAGATC GACAACGATA TCATCGTATT AGCAACGCCA GAAATCGCTA ATCTGCCAGC TTGGGTTATC GCGCTGGTGG CTGCGGGTGG TCTTGCTGCG GCGCTATCAA CCTCTGCGGG TCTGTTGTTG GTTATCTCTA CTTCAGTATC ACATGACTTA CTGAAGAAGA ACCTGATGCC GAATATCTCT GACAAGAAAG AGTTAATGTA CGCTCGACTT GCTGCTGGTA TCGGTATTGT GATTGCCGGT TACTTCGGGG TTAACCCTCC AGGATTCGTA GCAGCTGTGG TGGCATTCGC CTTCGGTCTG GCAGCGTCAT CTCTGTTCCC TGCGATTATC ATGGGTATCT TCTCTAAGAC CATGAACAAA GAAGGTGCTA TTGCAGGTAT GGTAATAGGT TTACTGTTCA CTGCGGGTTA TATCATCTAC TTCAAGTTTG TGAACCCAAC GGCCAACGTA TCGGCGAACT GGTTCCTCGG TATTTCGCCA GAAGGTATCG GTATGGTGGG TATGCTAGTG AACTTTGCGG TTGCGGCTAT TGTCTGCAAA CTGACCGCAG CGGCACCAGC CCACGTACAG GATATGGTTG AGTCTATCCG TTTCCCTAAA GGGTCGGGTG AGGCCAGCGG CCACTAA
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Protein sequence | MGVQGLTYLI VGLSFALYIG IAIWSRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFVGER YYSQAARTVA VICAIFICFT YIAGQMRGVG VVFSRFLEVE VDTGVYIGMA VVFFYAVLGG MKGITYTQVA QYCVLIFAFM VPAIFLSVMM TGHIIPQIGF GAQLIDAAGN NSGVYLLEKL NNLSVDLGFA PYTDGSKSMI DVFCITGALM VGTAGLPHVI VRFFTVPKVK DARISAGWAL VFIAIMYTTV PALAAFSRVN MIETINGPDQ KGVAYETAPD WIKNWEKTGL IKWDDKNGDG KIYYAKGKME DAASPNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL LKKNLMPNIS DKKELMYARL AAGIGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII MGIFSKTMNK EGAIAGMVIG LLFTAGYIIY FKFVNPTANV SANWFLGISP EGIGMVGMLV NFAVAAIVCK LTAAAPAHVQ DMVESIRFPK GSGEASGH
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