| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1562 |
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| Symbol | |
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| ID | 4258154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1823755 |
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| End bp | 1824729 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122210 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_737617 |
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| Protein GI | 114047067 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.141715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT CACACGCTAA CGCTCCACAA ACATCATCGA ATAGCCATGA GCCATTGCAG
GTTTCTTCAC ACTTTAGCTG TTATCACCAG GCCGAAATTT ACGGCAAAAG CAAAGTGGTT
AAAGCGCCTT GGCAATCCTT CGGTTTAGCG GTATTTGCTG GCGCTTTTAT TGCCTTAGCC
TTTGTGTTTT ATCTGACAGT CACTACGGGG GCGGGTGATA GCGCCTGGGG TTTAGTGCGC
CTAGTGGGTG GGATTGCCTT CAGCTTAGGC TTAATTTTAG TGGTGATTTG CGGTGGCGAG
CTGTTTACCA GTTCAGTGCT GAGCAGTGTT GCATGGGCGC AAAAACAGGT GACCACCAGT
GAATTGCTCA AATGCTGGAG CCGCGTGTAT ATCGGCAACT TCGTCGGCGC CATATTAATG
GTTGGCTTGA TCATGGCGGC GGGCTTATAT GAGCTCGATG GCGGTAACTG GGGCTTAAAC
GCGCTAAAAG TGTCACAGCA TAAGCTGCAT CATACTTGGG TGCAGGCATT CAGCTTAGGT
ATTTTATGTA ACATGTTGGT GTGTCTGGGT ATTTGGATGA CCTTCGCCAG CCGCGAATCC
CTAACCAAAG CGATTTTACT GATCCTCCCG GTAGCCATGT TTGTCAGCAG TGGCTTTGAG
CACAGTATCG CAAACCTGTT TATGGTGCCG CTTGGGATCA CTATTCAGTC GGTCGCCAGC
CCTGAGTTTT TTGCATCCCT AGGTGTGACC CAAGAGCAAT TTGCCGATTT AACCGTGGCA
AACTTTGTAT TCAATAACTT AATTCCCGTG ACCTTAGGCA ACATTGTCGG CGGTGGTGTG
ATCGTCGGTC TCGGCTATTG GTGGATTGAG CAAGGTCAAA TTGCCTTACC CGATCCGCAA
AAATCCCATC AGCCACACTT TTTTGCATCG CCGTTGCACA CTGAAAAGGC GAAAAATAGC
CAAGAAAGTA AGTAA
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| Protein sequence | MKDSHANAPQ TSSNSHEPLQ VSSHFSCYHQ AEIYGKSKVV KAPWQSFGLA VFAGAFIALA
FVFYLTVTTG AGDSAWGLVR LVGGIAFSLG LILVVICGGE LFTSSVLSSV AWAQKQVTTS
ELLKCWSRVY IGNFVGAILM VGLIMAAGLY ELDGGNWGLN ALKVSQHKLH HTWVQAFSLG
ILCNMLVCLG IWMTFASRES LTKAILLILP VAMFVSSGFE HSIANLFMVP LGITIQSVAS
PEFFASLGVT QEQFADLTVA NFVFNNLIPV TLGNIVGGGV IVGLGYWWIE QGQIALPDPQ
KSHQPHFFAS PLHTEKAKNS QESK
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