Gene Shewmr7_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1550 
Symbol 
ID4258142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1810443 
End bp1811549 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID638122198 
Producthypothetical protein 
Protein accessionYP_737605 
Protein GI114047055 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.172747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGTT CCAATACGCC GTCTGCCGCT TACAAAGGTT TTGCCGTCAT GGCCTTTGTG 
GTGATTATTT TGGCAGGGAT AAAGGCCGCC AGCCCGATTG TTGTTCCCTT TGTGTTATCC
AGTTTTATTG CGGTGATTTG TAATCCGGCG ATTGGCTTGA TGACCAAATA TCGCGTACCT
AAATGGCTCG CGGTGATCCT GTTGATGGGA TTTATCGTGT TGATGGGCTT GTGGCTCGCC
TCTCTGGTAG GCAGCTCCAT TAATGAGTTT TCTAAGCAGT TGCCGCAGTA TCGCGATCAG
CTGGTGGAGC AGTTTTCTTG GGTGCTGCAT AAGTTGCAGG CGCTGAATAT CCAAATCTCC
AAGGAACAAG TGCTGGCCTA TTTCGACCCC GGCATGGCGT TGTCTATGAC CACCAATATG
CTCTCGGGTG TCGGCAATGT GATGGCGAAT TTGTTCCTGA TCATTCTGAC CATCGTCTTT
ATGCTGTTTG AGGCGCAATC TTTGCCGAAA AAACTGCACT TGGCGCTGGA CGATCCGGAC
ATGCGTTTGC AGCAGATTGA CCGTTTTCTG CAATCTGTGA ATCAATATAT GGTGATCAAG
ACCTTAGTCA GTTTAGCGAC GGGCTTGATT GTCGGCGTGG GGCTTGCGGT TATTGGGGTG
GATTACGCGC TGCTTTGGGC GGTTATTGCC TTTTTATTCA ACTATATCCC GAATATCGGC
TCGATTATCG CGGCCATTCC CGCCGTGTTG CTGGCCTTTA TCCAATTAGG CCCTGCAGCG
GCTGGCGGTA CGGCGATGTT ATACGTCGGC GCAAATATGG TGATGGGCAA TGTGGTCGAG
CCTAAGTTTA TGGGCCGCGG TCTCGGGCTT TCCACCCTAG TGGTGTTCTT ATCATTAATT
TTTTGGGGGT GGTTACTGGG CTCGGTCGGC ATGTTGCTGT CGGTTCCCTT AACCATGGTC
GTCAAGATCG CCCTCGAATC CAGTAAGAGT GGTGGCTGGT TAGCCATTTT ATTATCCGAC
GATGTGGATG ATAAACTAGT AAGCCAATCG ACAAGCACCG CTCCGATTTC TGAACCTGTC
GATACCCATT CAACAGATAA TAAGTAG
 
Protein sequence
MTRSNTPSAA YKGFAVMAFV VIILAGIKAA SPIVVPFVLS SFIAVICNPA IGLMTKYRVP 
KWLAVILLMG FIVLMGLWLA SLVGSSINEF SKQLPQYRDQ LVEQFSWVLH KLQALNIQIS
KEQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEAQSLPK KLHLALDDPD
MRLQQIDRFL QSVNQYMVIK TLVSLATGLI VGVGLAVIGV DYALLWAVIA FLFNYIPNIG
SIIAAIPAVL LAFIQLGPAA AGGTAMLYVG ANMVMGNVVE PKFMGRGLGL STLVVFLSLI
FWGWLLGSVG MLLSVPLTMV VKIALESSKS GGWLAILLSD DVDDKLVSQS TSTAPISEPV
DTHSTDNK