Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1535 |
Symbol | |
ID | 4257776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1788172 |
End bp | 1790658 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122183 |
Product | hypothetical protein |
Protein accession | YP_737590 |
Protein GI | 114047040 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000356269 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00903713 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAC TCATTTTGTG TGTTGCGATT GCATCAGCAC TGGGCCTCAC AGGATGTGGC GAGGACAGTT ATAACGAACT CAAGGATAAG ACAGAGCCGC TCATCCCTGA ATCCCATATG GTGTTTGACC CCGCGAATGC TAAAGTGCCT TTGCCTAATG ATTTGCTGTT CAGCGGCACC ACAGATGGCA CCTTATCTAT CCCGGGGGAA AGTTCGGGGA ACTATGTCGA TCCGCAAATT GCCCTTGGTG CCTTAGATGG ATGGTCAACC ACATCACCCA TTTCAATCGA TCTCGAACTC GCTAAAGATC ACGATGGCAC ACAACTGACC CTGATGGCCG CATCGGTAGC CCAACCGGGC GCAGTGAGAA TGTTTGAGGC CACAGTGGGT GGTCCATTGT CATCGGATCC TGAATGTACT ACTAAACCGT CAGTATCCGC CTGTAAAGTC GGCGACGAAT TGCAATTTGG TGTCGATTTT GTGTCGATGG CATCGGGTAA CAAAGTCGTT ATCGTGCCAC TCAAACCGCT AAAAGCCGGC CAGTCTTATA TTTATGCGAC AACCAAGTTA ATCCAAGATT CAGAGGGACG AGGCATTGCC CCTTCAACGA CCTATGGTAC GTTGAAGATG GATATCAACA CCTTACCCCT AGAAACGCCT GATCAATTGA TGCTGCAAAC CTTGATCAAC AGTTATGAAA AGGGCATGGC TGCGGCACAT AATGTCGATA CCTCAACCAT TACCTATTCA GGCTTGTTTA CCACTCAATC GGTAGCAAAC GTCTATGAAA CCACAAAACT CTTGATGGCA CAGGGCGCGC CTTATGCGCC AAGTTTTGCG CAAATGCCGA CCCCTGCGGG GTTTACAGTA GCAGAGATGT TAAGGTTACC ACCTAATCTT AATGATCCTG TCTATGTGGT TTCAAACTTA GCCGATGTCT ATACCGCTAA GATTAAATTG CCGATTTACG GTGACTGCTC TTCAGTCAGC TGCTTGTCAT CGGCAGGTCA GCCGCTGATC AATGGCCGCT GGAAAGCCCA AGGTGATAGC CCTGTTTCGG TATTATTGGC GCTGCAAGCG GGTACCTTAA GTCAGACCAA CTTTGGTATG CAGGCAGTAG CAAATGGGAT CGCAAACCCT GCCGATGCTT TAGCAAATCC TTCTTTGATG GCGGGTAAAA CCTGGTTGCT CGATGATGGA ACGGCAGCGG ATAAAACCAA GCATTTAACC AAATTTAACC CTATCCCTGC GATTAAAGGT TATGAAACGG TACCTGTACT GATTTCTATG CCAAATGCGA CCAAACTCGC GGCCTTCTAT CAGCAACAAG GGTTAACCTT TACTCCACCG ACTTCTGGCT GGCCAACGAC GATTGCGCTA CATGGTTTAG GCGGCGGTAA GGAAATGTCA TTAGCCTATG CGGGCAGTTA TGCCGCCATG GGCGTGGCAA CTGTGGCCAT CGATATGCCT TTACATGGTG CTCGCTCGTT CGATGCCAAT GGCGATGGGA TTTACGAAGT ATCGGCAACC GATCCTTCCT TCGGTAACGT GATTGGTACG CCTGATGCCT TTAAAAATGG TAATCCACTC GTCTTCGTGA ATATCTCAAG CACGCTGTCG GTGCGGGATA ACTTCCGTCA GGCCACCATG GATCACCTTG GCGTGCGTTT AGCCTTAACG GGTTTAGCGC AGGGGCTTGC TCAGGCTGGT CAGAAACAAG TATTTGATAT TTCCAAGATT AGTGCGCAGG GCTTAAGTTT AGGTGCGATT GTCGGTACCG ACTTTGCGAC TTATGCCAGC ACGGGCATGA AAAATCCAAG CACGGGCGAA GCGCTACCTA ACCCTTATGA CATCAATGCG GTCTCTCTGG CGGCGCCAGC GGGTGGTTTA GCGGGCGCGT TTGCCGGTTC TGCGACCTTT GGCCCAGTGC TGTTTAGCAA TGTGACTGCT TCTGCAACGT TCCAAGCATT AGTGGATAAA GCCAATACTG CGGGATACGA GCCAGGCAGC CCAGAATATG CGGCATTAGT ACAAGGGGTT TACGCGCAGT TTATTCCAAC CTTTGCCTTT GCGGTGCAAA CGGCGGTGGA TTCAGCGGAT CCGGTTAACC ATGCAGGTAT GTTAAAAGCA ACGGGATTAC CCGTACACTT AATTGAAATC GCGGGTGATG GTAACGGTAA CTTAGCTGAC CAAGTGTTAC CTAATCGCGT CGATAACTTC CCACTCTCAG GCACTGAGCC GTTGATCTCG GCAATCGGTC TGCCTTGTGT GGATGCAACC ACCAAAGGTT CTGGTGCGGT GCGTTTTGCT AAGGGTCACC ATAGCTCAAT TGTTGACCCA AGTGAGAAGA GTTCAACGGA TGGTATGGCC GCTGCGGCAA CCGTTGAGAT GCAGACGCAA GTGGCGACCT ATGCTTCTAC CGCAGGTAAA GGTGAAGCGA CTATTTTCGT CACCGATCCA AGCGTGATTG CGACCTGTTC TAACTAG
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Protein sequence | MKRLILCVAI ASALGLTGCG EDSYNELKDK TEPLIPESHM VFDPANAKVP LPNDLLFSGT TDGTLSIPGE SSGNYVDPQI ALGALDGWST TSPISIDLEL AKDHDGTQLT LMAASVAQPG AVRMFEATVG GPLSSDPECT TKPSVSACKV GDELQFGVDF VSMASGNKVV IVPLKPLKAG QSYIYATTKL IQDSEGRGIA PSTTYGTLKM DINTLPLETP DQLMLQTLIN SYEKGMAAAH NVDTSTITYS GLFTTQSVAN VYETTKLLMA QGAPYAPSFA QMPTPAGFTV AEMLRLPPNL NDPVYVVSNL ADVYTAKIKL PIYGDCSSVS CLSSAGQPLI NGRWKAQGDS PVSVLLALQA GTLSQTNFGM QAVANGIANP ADALANPSLM AGKTWLLDDG TAADKTKHLT KFNPIPAIKG YETVPVLISM PNATKLAAFY QQQGLTFTPP TSGWPTTIAL HGLGGGKEMS LAYAGSYAAM GVATVAIDMP LHGARSFDAN GDGIYEVSAT DPSFGNVIGT PDAFKNGNPL VFVNISSTLS VRDNFRQATM DHLGVRLALT GLAQGLAQAG QKQVFDISKI SAQGLSLGAI VGTDFATYAS TGMKNPSTGE ALPNPYDINA VSLAAPAGGL AGAFAGSATF GPVLFSNVTA SATFQALVDK ANTAGYEPGS PEYAALVQGV YAQFIPTFAF AVQTAVDSAD PVNHAGMLKA TGLPVHLIEI AGDGNGNLAD QVLPNRVDNF PLSGTEPLIS AIGLPCVDAT TKGSGAVRFA KGHHSSIVDP SEKSSTDGMA AAATVEMQTQ VATYASTAGK GEATIFVTDP SVIATCSN
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