Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1531 |
Symbol | |
ID | 4257772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1784782 |
End bp | 1785570 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122179 |
Product | condensin subunit ScpA |
Protein accession | YP_737586 |
Protein GI | 114047036 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.265765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0177509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGCA CGCAACAAAG TTTACCCTTA GCCGTTGTTC GCGGTCAGGC AATGACCGAG ATGCCACAGG ATTTGTTTAT TCCACCTGAG GCGTTAGAAG TGTTTTTAGA GTCCTTCGAA GGGCCGCTCG ACTTACTTTT ATATTTGATC CGTAAGCAAA AATTAGATGT TGTCGATTTA CCCATTTCGC AGATCACCGC GCAATATTTA GAATATATCG CGATGCTCAC TCAGGCGCGT ATCGAACTGG CCTCGGATTA TCTGGTCATG GCGGCAACAC TGGCTGAGAT TAAATCCCGT CTGCTGCTGC CGCGTATGGT GGCGGAAGAT GAAGTGGAGG AAGATCCACG GGCACAGTTG ATCCGTCAAT TGAAGGCCTA TGAGGTAATC AAAGAAGCCT CGCAAAAAAT TGATGATTTA CCTCGGCTTG AACGCGATGT GTTTCAAGCA ACCGCGGCAC CTTCACCGAA TATCAAACCT TTGGTGATCC CGCCTGATGT ATCGTTATTT GAAATCGCCC GCGCCTTTGG CGAAGTGCTC AAACGTATCG ATGCCAACGA AGATCATCAT GTTAAGCGTG AACAGTTATC GACCCGCGAG CGCATGAGCC AAATTTTAGC CATGCTTAAT AGCGAGACGT TTACGCCCTT TGAGTGTTTA TTCAGTGTCG AAGAAGGCCG CGCCGGTGTG GTGGTGACCT TTTTAGCGCT GATGGAATTG GTCAAAGAAC TATTAGTGGA ATTGTACCAA ACAGAGCCGT TTTCAACTAT TTACGTAAAG GCCTATTAA
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Protein sequence | MQGTQQSLPL AVVRGQAMTE MPQDLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVDL PISQITAQYL EYIAMLTQAR IELASDYLVM AATLAEIKSR LLLPRMVAED EVEEDPRAQL IRQLKAYEVI KEASQKIDDL PRLERDVFQA TAAPSPNIKP LVIPPDVSLF EIARAFGEVL KRIDANEDHH VKREQLSTRE RMSQILAMLN SETFTPFECL FSVEEGRAGV VVTFLALMEL VKELLVELYQ TEPFSTIYVK AY
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