Gene Shewmr7_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1531 
Symbol 
ID4257772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1784782 
End bp1785570 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content47% 
IMG OID638122179 
Productcondensin subunit ScpA 
Protein accessionYP_737586 
Protein GI114047036 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.265765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0177509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCA CGCAACAAAG TTTACCCTTA GCCGTTGTTC GCGGTCAGGC AATGACCGAG 
ATGCCACAGG ATTTGTTTAT TCCACCTGAG GCGTTAGAAG TGTTTTTAGA GTCCTTCGAA
GGGCCGCTCG ACTTACTTTT ATATTTGATC CGTAAGCAAA AATTAGATGT TGTCGATTTA
CCCATTTCGC AGATCACCGC GCAATATTTA GAATATATCG CGATGCTCAC TCAGGCGCGT
ATCGAACTGG CCTCGGATTA TCTGGTCATG GCGGCAACAC TGGCTGAGAT TAAATCCCGT
CTGCTGCTGC CGCGTATGGT GGCGGAAGAT GAAGTGGAGG AAGATCCACG GGCACAGTTG
ATCCGTCAAT TGAAGGCCTA TGAGGTAATC AAAGAAGCCT CGCAAAAAAT TGATGATTTA
CCTCGGCTTG AACGCGATGT GTTTCAAGCA ACCGCGGCAC CTTCACCGAA TATCAAACCT
TTGGTGATCC CGCCTGATGT ATCGTTATTT GAAATCGCCC GCGCCTTTGG CGAAGTGCTC
AAACGTATCG ATGCCAACGA AGATCATCAT GTTAAGCGTG AACAGTTATC GACCCGCGAG
CGCATGAGCC AAATTTTAGC CATGCTTAAT AGCGAGACGT TTACGCCCTT TGAGTGTTTA
TTCAGTGTCG AAGAAGGCCG CGCCGGTGTG GTGGTGACCT TTTTAGCGCT GATGGAATTG
GTCAAAGAAC TATTAGTGGA ATTGTACCAA ACAGAGCCGT TTTCAACTAT TTACGTAAAG
GCCTATTAA
 
Protein sequence
MQGTQQSLPL AVVRGQAMTE MPQDLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVDL 
PISQITAQYL EYIAMLTQAR IELASDYLVM AATLAEIKSR LLLPRMVAED EVEEDPRAQL
IRQLKAYEVI KEASQKIDDL PRLERDVFQA TAAPSPNIKP LVIPPDVSLF EIARAFGEVL
KRIDANEDHH VKREQLSTRE RMSQILAMLN SETFTPFECL FSVEEGRAGV VVTFLALMEL
VKELLVELYQ TEPFSTIYVK AY