Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1530 |
Symbol | |
ID | 4257771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1783972 |
End bp | 1784592 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122178 |
Product | translation factor SUA5 |
Protein accession | YP_737585 |
Protein GI | 114047035 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.473863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0177509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGT TTTTTTATGT ACACGAAGTA AATCCGCAGG TACGCCTGAT CAGTCAAGCC GTGGCTGTAC TTAAGTCCGG TGGTGTGATT GTATATCCAA CCGATTCGGG TTATGCCCTC GGTTGTATGA TTGGCGAGAA AGACGCGATG ACGCGCATTA CCCGCATTCG TCAAATCGAG CATGATCATA ATTTCTCGTT AATGTGCCGC GACTTATCTG AGCTTTCGAC CTATGCCAAG GTGGATAATC AGGCCTACCG CATCTTAAAA AGCTGCACGC CGGGACCTTA CACTTTCATC TTTAAGGCGA GCAAGGAAGT GCCCCGTCGT CTGCAAAATG ACAAGAAGAA AACCATTGGT ATCCGCGTGC CAGACAATGT GATTGCCTTG GCGCTGCTCG AGGCGTTAGA TGCGCCGCTG ATGTCGACCA GTTTGGTGAT GCCTAATAGT GATTTTGCAG AATCGGATCC TGAGCACATT CGCGATCTGT TAGAGCATCA AGTGGATGTG ATCCTGCACG GTGGCTACTT AGGTGAGAAA CCGACCACAG TCATCGATAT GTCGGAAGAT GGTTTCGAAG TGCTGCGTGA AGGCGCGGGT GATGTTACCC CATTTCTCTA A
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Protein sequence | MSQFFYVHEV NPQVRLISQA VAVLKSGGVI VYPTDSGYAL GCMIGEKDAM TRITRIRQIE HDHNFSLMCR DLSELSTYAK VDNQAYRILK SCTPGPYTFI FKASKEVPRR LQNDKKKTIG IRVPDNVIAL ALLEALDAPL MSTSLVMPNS DFAESDPEHI RDLLEHQVDV ILHGGYLGEK PTTVIDMSED GFEVLREGAG DVTPFL
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