| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1526 |
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| Symbol | trpD |
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| ID | 4258276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1779374 |
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| End bp | 1780417 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122174 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_737581 |
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| Protein GI | 114047031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.016321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAA CATCGATTCA GCCCCTGCTC GATATATTGT TTCAGGGTAA AGCATTAACC
CGCGAGCAAA CAGCCAGCCT CTTTAGCACC CTTATTCAAG GTGAAATGAA TGAGGCCGTG
ATGGCGGGCA TGTTAATGGC TCTTAAAATT CGCGGTGAAA CCATTGCCGA AATCAGTGGC
GCCGCCGATG CGATGCGCGC CGCGGCTAAG CCTTTCCCTT ATCCCTCATC TAAGCGGACT
GAAGGGATTA TCGATATCGT CGGCACGGGT GGTGATGGTT TTAATACCAT TAATATCTCC
ACTACCGCAG CCTTTGTCGC CGCAGCCGCT GGCGCCAAGG TTGCAAAACA CGGTAATCGT
TCAGTCTCGA GCAAATCGGG CTCTTCAGAT TTACTCGCCC AATTTGGCAT CGATTTAACC
ATGTCACCCG AGCTGGCGAG CCGCTGCCTC GAATCACTCA ATCTGTGTTT CCTGTTTGCG
CCCCACTACC ATGGAGGTGT CAAGCATGCC GTGCCTGTGC GCCAAGCGCT GAAAACTCGC
ACCTTATTCA ATGTGTTAGG GCCATTGATT AACCCAGCGC GCCCAGAATT TATGCTGCTT
GGGGTCTATA GCCCAGAGCT GGTGACACCC ATCGCCCGCG TACTGCAAGC CCTTGGCACG
CAAAGAGCCA TGGTGGTGCA CGGCAGTGGT TTAGATGAAG TGGCACTCCA TGGCAGCACC
CAAGTCGCCG AACTCAAAGA CGGTGAGATT ATTGAATATC AACTAACGCC TGCAGATTTT
GGTGTACCTC AGGCCCAAAT TAGTGAGCTT GAAGGGGGCG AGCCTGCACA AAACGCCCAA
ATCACGCAAT CTATTTTGCA AGGACAAGGT AGCGATGCCC ACACCCATGC TGTTGCCATC
AATGCCGGTT GTGCCTTATA TCTGTGTGGC CTGTCCGACT CAGTGAAAGC CGGCACCGCC
CTTGCGCTCA ATACCATAAA AAGTGGCAAA GCCTTTGAAT TACTGAATCA ACTCGCTAAA
GTCAGCAGCG AAACACAGGA ATAA
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| Protein sequence | MSATSIQPLL DILFQGKALT REQTASLFST LIQGEMNEAV MAGMLMALKI RGETIAEISG
AADAMRAAAK PFPYPSSKRT EGIIDIVGTG GDGFNTINIS TTAAFVAAAA GAKVAKHGNR
SVSSKSGSSD LLAQFGIDLT MSPELASRCL ESLNLCFLFA PHYHGGVKHA VPVRQALKTR
TLFNVLGPLI NPARPEFMLL GVYSPELVTP IARVLQALGT QRAMVVHGSG LDEVALHGST
QVAELKDGEI IEYQLTPADF GVPQAQISEL EGGEPAQNAQ ITQSILQGQG SDAHTHAVAI
NAGCALYLCG LSDSVKAGTA LALNTIKSGK AFELLNQLAK VSSETQE
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