| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1523 |
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| Symbol | trpA |
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| ID | 4258273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1775747 |
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| End bp | 1776583 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122171 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_737578 |
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| Protein GI | 114047028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.107227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA TTTCAAATCA AACTATCCCT CATCAAGCTG GCCGTTATCA CGCAGCGTTT
AGCCGTTTAA AAGCCGAAGG CCGCGGCGCC TTTGTGCCCT TTGTTACTTT GGGCGATCCA
AGCCCTGAGC TGTCACTGAA AATTATCGAC ACCTTAGTGC AAAATGGTGC GGATGCACTG
GAATTAGGCT TTCCCTTCTC CGATCCGCTG GCAGACGGCC CTGTTATCCA AGGCGCGAAC
CTCAGAGCCC TCGCCGCAGG CACAACGCCA ACGCAGTGCT TCAACTTATT AGCGCAAATT
CGCGCTAAAT ACCCAGAGCT GCCAATTGGG TTATTGCTGT ACGCAAACCT CGTATTCGCC
AATGGCATCG ATGCTTTTTA TGCCAAAGCG CAGCAAGCGG GCGTAGATTC AGTGCTTATT
GCCGATGTGC CAGTAGAAGA AGCGGCGCCT TTTATTCAAG CCGCTAAGGC CCATGGTATC
GCGCCGATTT TTATCGCGCC GCCCAATGCC GATAGCGACA CCCTTGAAAA CGTGAGCAAA
AGTGGCGAAG GCTATACCTA TCTGTTGTCC CGCGCTGGTG TAACAGGCAC AGACACTAAG
GCAGGAACAC CCGTTGAAGA AATTTTAGCT AAGCTGCAAG CATTTAATGC GCCGCCACCG
CTATTAGGCT TTGGGATTGC CGAGCCGGCT CAAGTGAGCG CCGCCATTCA AGCGGGCGCT
GCGGGTGCAA TTTCTGGCTC GGCCGTGGTG AAAATTATCG AAACTTATCA ACAGGATGAA
GCTAAACTGC TGTCCACCTT AGGCGAATTT ACCCGCGCAA TGAAAGCGGC AACCTAA
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| Protein sequence | MSSISNQTIP HQAGRYHAAF SRLKAEGRGA FVPFVTLGDP SPELSLKIID TLVQNGADAL
ELGFPFSDPL ADGPVIQGAN LRALAAGTTP TQCFNLLAQI RAKYPELPIG LLLYANLVFA
NGIDAFYAKA QQAGVDSVLI ADVPVEEAAP FIQAAKAHGI APIFIAPPNA DSDTLENVSK
SGEGYTYLLS RAGVTGTDTK AGTPVEEILA KLQAFNAPPP LLGFGIAEPA QVSAAIQAGA
AGAISGSAVV KIIETYQQDE AKLLSTLGEF TRAMKAAT
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