Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1518 |
Symbol | |
ID | 4258268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1769919 |
End bp | 1771814 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122166 |
Product | IucA/IucC family protein |
Protein accession | YP_737573 |
Protein GI | 114047023 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.918024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAG CCACTAACCG CGCATTACTC AAGCCATTCA CTCAAGCCGA ATTCCCCACG CTGGAGGCCG CTGCCCACCC GCACATCCCC GCCCACTTAA TGCCGGAATA TTGGCAGGCG GCCAATCGCC ATTTAGTGAA GAAAATCCTC TGCGAATTTA CCCATGAGAA GATCATCACC CCACAAATAT ACCGCCAAGC GGCAGGCATC AATCACTATG AACTGAGGCT CAAGAACTGC ACCTATTACT TCAGTGCGCG CCATTATCAG CTCGACCACC TTGAGATAGA AGCAGGGTCG ATTCGCGTCA GCAGCGCGGG CCAAGACAAG CCACTCGATG CCATGAGTTT GATTATCCAA CTGAAAGATG CCTTGGGCAT GAGTGAAACC CTGCTGCCCA CTTACCTAGA GGAAATCACC AGCACCCTCT ACAGCAAGGC CTACAAGTTG GCCCATCAAG CTATCCCCGC CGCTACACTC GCTAAGGCCG ATTATCAAAC TATTGAGGCG GGCATGACCG AGGGCCATCC GGTGTTTATC GCCAACAATG GCCGTATTGG TTTTGATATG CAGGACTATT ACCAATTTGC CCCCGAGAGT GCCAGCGTGC TTCAGCTAGT GTGGATTGCG GTGCGTAAGG ACAAAACCAC CTTCTCCTCC CTCGAAGGAT TAGACCATGA TAGTTTGTTA AAACAGGAGC TTGGCGAACA GTTCACCGAG TTTCAACAAC ACTTAAGCGC ACTGGGGCAA GCGGCCGATA GCTTTTATTT TATGCCCGTT CATCCTTGGC AGTGGCGCGA AAAAATTGCC CGCACCTTTG CCGGCGAAAT CGCCCGTGGC GACATCATTT ATCTCGGCGA AAGCCAAGAT TGCTATCAAG TTCAACAATC GATCCGCACC TTCTTAAACT TAAGCGCGCC GCAAAAATGC TACGTCAAAA CCGCGCTTTC TATCTTAAAC ATGGGCTTTA TGCGTGGGCT TTCGCCGCTG TATATGAGCT GCACCCCGCA GATCAACGCT TGGGTAGCCG ACCTTATCGA AAGCGACAGC TATTTTGCCG AGCAAGGTTT TGTGATCCTA AAAGAAATCG CCGCAATTGG TTATCACCAC AGGTATTACG AAGAGGCACT CACCCAAGAT AGCGCCTATA AGAAAATGCT GTCGGCGCTG TGGCGCGAGA GTCCGCTGCC GCACATTGAG CCGCAGCAAA CCCTGATGAC CATGGCGGCG TTATTACACG TCGATCATCA GGAGCAAGCC CTGCTTGCCG CCTTAATCAC GCACTCGGGC TTAAGCGCCA AGGAGTGGGT CAAGCGCTAT CTCAACCTCT ACTTATCGCC ATTACTGCAC GCCTTCTTTG CCTACGATCT GGTGTTTATG CCCCATGGCG AGAACCTGAT TTTAGTGCTC GATGCTGGCG TCCCGGTCAA AATATTGATG AAGGATATCG GCGAAGAAGT CGCAGTACTC AACGGCAGCG AACCACTGCC GCAAGAAGTG CAGCGCCTTG CGGTCGAGCT TGAGGAAGAG ATGAAGCTTA ACTATATCTT GCTCGATATT TTTGACTGTA TTTTCCGCTA TTTAGCGCCA ATTCTGGATA AGCAAACCGA GGTCAGCGAA GCGCAGTTTT GGGCGCTTGT GGCAGACAAT GTGCGCGACT ATCAAGCGCA GCATCCGCAC TTGGCAGACA AATTTGCACG ATACGATCTC TTTAAAGACA GCTTCGTTCG CACTTGCCTG AATCGCATTC AGCTCAATAA CAACCAGCAG ATGATTGACC TTGCCGACAG GGAAAAAAAT CTGCGCTTTG CGGGCGAAAT TGTTAATCCG CTGGCCGCCT TTAGGCAAAG CCATGCATTT GGCTCAGTAA ATCAGAAGCT TAAACCCAAA CCCTAA
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Protein sequence | MNLATNRALL KPFTQAEFPT LEAAAHPHIP AHLMPEYWQA ANRHLVKKIL CEFTHEKIIT PQIYRQAAGI NHYELRLKNC TYYFSARHYQ LDHLEIEAGS IRVSSAGQDK PLDAMSLIIQ LKDALGMSET LLPTYLEEIT STLYSKAYKL AHQAIPAATL AKADYQTIEA GMTEGHPVFI ANNGRIGFDM QDYYQFAPES ASVLQLVWIA VRKDKTTFSS LEGLDHDSLL KQELGEQFTE FQQHLSALGQ AADSFYFMPV HPWQWREKIA RTFAGEIARG DIIYLGESQD CYQVQQSIRT FLNLSAPQKC YVKTALSILN MGFMRGLSPL YMSCTPQINA WVADLIESDS YFAEQGFVIL KEIAAIGYHH RYYEEALTQD SAYKKMLSAL WRESPLPHIE PQQTLMTMAA LLHVDHQEQA LLAALITHSG LSAKEWVKRY LNLYLSPLLH AFFAYDLVFM PHGENLILVL DAGVPVKILM KDIGEEVAVL NGSEPLPQEV QRLAVELEEE MKLNYILLDI FDCIFRYLAP ILDKQTEVSE AQFWALVADN VRDYQAQHPH LADKFARYDL FKDSFVRTCL NRIQLNNNQQ MIDLADREKN LRFAGEIVNP LAAFRQSHAF GSVNQKLKPK P
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