Gene Shewmr7_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1518 
Symbol 
ID4258268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1769919 
End bp1771814 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content51% 
IMG OID638122166 
ProductIucA/IucC family protein 
Protein accessionYP_737573 
Protein GI114047023 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.918024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAG CCACTAACCG CGCATTACTC AAGCCATTCA CTCAAGCCGA ATTCCCCACG 
CTGGAGGCCG CTGCCCACCC GCACATCCCC GCCCACTTAA TGCCGGAATA TTGGCAGGCG
GCCAATCGCC ATTTAGTGAA GAAAATCCTC TGCGAATTTA CCCATGAGAA GATCATCACC
CCACAAATAT ACCGCCAAGC GGCAGGCATC AATCACTATG AACTGAGGCT CAAGAACTGC
ACCTATTACT TCAGTGCGCG CCATTATCAG CTCGACCACC TTGAGATAGA AGCAGGGTCG
ATTCGCGTCA GCAGCGCGGG CCAAGACAAG CCACTCGATG CCATGAGTTT GATTATCCAA
CTGAAAGATG CCTTGGGCAT GAGTGAAACC CTGCTGCCCA CTTACCTAGA GGAAATCACC
AGCACCCTCT ACAGCAAGGC CTACAAGTTG GCCCATCAAG CTATCCCCGC CGCTACACTC
GCTAAGGCCG ATTATCAAAC TATTGAGGCG GGCATGACCG AGGGCCATCC GGTGTTTATC
GCCAACAATG GCCGTATTGG TTTTGATATG CAGGACTATT ACCAATTTGC CCCCGAGAGT
GCCAGCGTGC TTCAGCTAGT GTGGATTGCG GTGCGTAAGG ACAAAACCAC CTTCTCCTCC
CTCGAAGGAT TAGACCATGA TAGTTTGTTA AAACAGGAGC TTGGCGAACA GTTCACCGAG
TTTCAACAAC ACTTAAGCGC ACTGGGGCAA GCGGCCGATA GCTTTTATTT TATGCCCGTT
CATCCTTGGC AGTGGCGCGA AAAAATTGCC CGCACCTTTG CCGGCGAAAT CGCCCGTGGC
GACATCATTT ATCTCGGCGA AAGCCAAGAT TGCTATCAAG TTCAACAATC GATCCGCACC
TTCTTAAACT TAAGCGCGCC GCAAAAATGC TACGTCAAAA CCGCGCTTTC TATCTTAAAC
ATGGGCTTTA TGCGTGGGCT TTCGCCGCTG TATATGAGCT GCACCCCGCA GATCAACGCT
TGGGTAGCCG ACCTTATCGA AAGCGACAGC TATTTTGCCG AGCAAGGTTT TGTGATCCTA
AAAGAAATCG CCGCAATTGG TTATCACCAC AGGTATTACG AAGAGGCACT CACCCAAGAT
AGCGCCTATA AGAAAATGCT GTCGGCGCTG TGGCGCGAGA GTCCGCTGCC GCACATTGAG
CCGCAGCAAA CCCTGATGAC CATGGCGGCG TTATTACACG TCGATCATCA GGAGCAAGCC
CTGCTTGCCG CCTTAATCAC GCACTCGGGC TTAAGCGCCA AGGAGTGGGT CAAGCGCTAT
CTCAACCTCT ACTTATCGCC ATTACTGCAC GCCTTCTTTG CCTACGATCT GGTGTTTATG
CCCCATGGCG AGAACCTGAT TTTAGTGCTC GATGCTGGCG TCCCGGTCAA AATATTGATG
AAGGATATCG GCGAAGAAGT CGCAGTACTC AACGGCAGCG AACCACTGCC GCAAGAAGTG
CAGCGCCTTG CGGTCGAGCT TGAGGAAGAG ATGAAGCTTA ACTATATCTT GCTCGATATT
TTTGACTGTA TTTTCCGCTA TTTAGCGCCA ATTCTGGATA AGCAAACCGA GGTCAGCGAA
GCGCAGTTTT GGGCGCTTGT GGCAGACAAT GTGCGCGACT ATCAAGCGCA GCATCCGCAC
TTGGCAGACA AATTTGCACG ATACGATCTC TTTAAAGACA GCTTCGTTCG CACTTGCCTG
AATCGCATTC AGCTCAATAA CAACCAGCAG ATGATTGACC TTGCCGACAG GGAAAAAAAT
CTGCGCTTTG CGGGCGAAAT TGTTAATCCG CTGGCCGCCT TTAGGCAAAG CCATGCATTT
GGCTCAGTAA ATCAGAAGCT TAAACCCAAA CCCTAA
 
Protein sequence
MNLATNRALL KPFTQAEFPT LEAAAHPHIP AHLMPEYWQA ANRHLVKKIL CEFTHEKIIT 
PQIYRQAAGI NHYELRLKNC TYYFSARHYQ LDHLEIEAGS IRVSSAGQDK PLDAMSLIIQ
LKDALGMSET LLPTYLEEIT STLYSKAYKL AHQAIPAATL AKADYQTIEA GMTEGHPVFI
ANNGRIGFDM QDYYQFAPES ASVLQLVWIA VRKDKTTFSS LEGLDHDSLL KQELGEQFTE
FQQHLSALGQ AADSFYFMPV HPWQWREKIA RTFAGEIARG DIIYLGESQD CYQVQQSIRT
FLNLSAPQKC YVKTALSILN MGFMRGLSPL YMSCTPQINA WVADLIESDS YFAEQGFVIL
KEIAAIGYHH RYYEEALTQD SAYKKMLSAL WRESPLPHIE PQQTLMTMAA LLHVDHQEQA
LLAALITHSG LSAKEWVKRY LNLYLSPLLH AFFAYDLVFM PHGENLILVL DAGVPVKILM
KDIGEEVAVL NGSEPLPQEV QRLAVELEEE MKLNYILLDI FDCIFRYLAP ILDKQTEVSE
AQFWALVADN VRDYQAQHPH LADKFARYDL FKDSFVRTCL NRIQLNNNQQ MIDLADREKN
LRFAGEIVNP LAAFRQSHAF GSVNQKLKPK P