| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1517 |
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| Symbol | |
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| ID | 4258267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1767620 |
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| End bp | 1769833 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122165 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_737572 |
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| Protein GI | 114047022 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0134645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.877607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA AGATCATTAT TATGAAAACC TTCCCCCTCA ACCGTCTCGC GGCGCACTGT
CAACTCGCCA TCACACGCCC TGAGCTTATT CTCTGCAGTG CCATACTCAG CATGCCCTAT
GCTTATGCCG ATGCCAGCGA TACCCAGAAA AAATCCACCA AAGACATTGA AATCATTAAT
GTCGTTGGCG CTAAGGATCT CCACGATAAT CGCTACAAAA CTCAGGCGAT GAACACGGCA
ACGGGTCTAG ATTTGTCCTA TTTAGAGACG CCGCAATCCG TCACCTCTGT TACCAGCCAA
ATGATGCATG ACCAACAACT AAACAGCGTC ATCGAAGCCA TGACCAGCGT GGCTGGCATC
AATGCTCGGC CGATGGACAA CGACAGATAC AGCATCAGCT CGCGCGGAAT TGCGGTCACT
AGCATTCTTT ACGATGGCGT GCCCACCACC TATGACACCC GTTTTAACTA CGGCGATAAC
CTTATCGATA CCGCCATCTA CGAGCGCGTG GAAATAGTCC GTGGCGCTAC AGGGTTAATG
ACAGGTGCAG GTAATCCCTC GGCCGCGATT AACCTTATTC GTAAACGCCC AACGCAAGAA
TTTATGGGCA GCACCTCAGT GAGTGTCGGC TCATGGAACA ATCTGCGCGG TATGGTCGAT
TTATCCAGCG GCTTAAATGA CAGTGGTAGC ATTCGTGGCC GGGTTGTCGC CGCCTATCAG
GATAAAGAAT CCTTCCAAGA CAGATACGAG CAACAACGCA CCACCCTCTA TGGCATTGTT
GAAACCGATA TTACCGACAG CACACTGCTG ACCTTAGGCG TGGATTATCA AGACACCACA
CCCGAAGCCA CTATGTCCGG CGGGCTGCCG CTGTTCCACA GTGATGGCAG CCGAACAAAT
TACGATCGCG CCACTTCCAC CGCCCCCGAT TGGGCCTCGG CGCATACCCA AGGACTCAAT
ACCTTCGCCA GCCTTCAACA TCGTTTTGAT AACGGTTGGG AACTAAAAGG CACTTACAGT
TACGGCGATA ACTCACTGAA ATATAATGTG CTGTGGGCTA CAGGTTACCC TGACCCCGTG
ACTAATCTTG GTGCCACCGC AGGCTCAATC GCCTATGTCG ATGGAAGTCG TACCCAACAT
AACCTCGACT TACGGGCGCA GGGAATGTTT GCCCTGTTTG GCCAAGAACA TCAGCTGACC
TTTGGCTGGA CGGGTCAGCG CCAAGAGTTT GCCAACCCTT ACTATTATCC TACGGCCGCC
GTGCCGCCCT TGGGAGATTT TCGCGATCCC AACTTCCAGT ATCCAAAACC TCAGTGGAAA
GAAACTCACA CCACGGGCTC CTTCGGCGAA ACCGAGCAAA GCGCCGCCTA TGTGGCCACG
CAGCTTAATC TGACCGATGC CTTGGCATTG CTCGCGGGCC TGCGCCTTAA CCAGTGGCAA
ACCGACCAAG ATAACTTTGG CAGCATGTAT GACTTTAAGG TCGACAATGA GCTCACCACC
TATTTTGGCC TGACCTACGC ACTGAGCGAG CAATACTCCC TCTACGCCAG TTATACGGAT
ATTTTCGCGC CGCAAACCTT GCAGCGCATA GATGCCAGTT ACATCGACCC CGTCAAAGGC
AAAAACTACG AGGCGGGCAT TAAAGCCAGC TTAATGGATG AAAGCTTAGA TATGTCGTTG
TCGGTATTTG AAATTCGCCA AGACAATGTT GGTGAACGCA CCGGAGATGT ACTGCCAGGT
ACCACTATCC CTGTGTATCG AGAGGTTAAC GGCACTAAGA CCCAAGGCTT TGAGTTTGAA
TCCACAGGCA AAATCACCGA TGACTGGAAT ATCTACTTCG GCTACACCCA ATTCAGTACC
GATGATCCTA AGGGCAATCG CATCAACACC TCATCTCCTC GCCAGCAGCT AAAACTCTTT
ACCACTTATA CCTTTAGCGG CGATTGGAAC AAGTTGCAGC TTGGCGCTGG GGTTAATTGG
CAAAGCCGAG TCTATCAAAC CGTCAACTCG CCCTTAGGCA GAGTCGAGGT TGAGCAAGGC
TCCTATGCGT TGGCCAGCCT AATGGCAAGT TATGCCTTTA CCGAGCAGGT AAAGCTAAGC
GCCAATGTGC ACAACGCCTT AGATAAAACC TACTACAGCC AAGTGGGGCA ATTTAGTCAG
TACCAATATG GTACCCCGCG CAGCGTGAGC GTGAATTTGG ATTACCGCTT CTAA
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| Protein sequence | MEFKIIIMKT FPLNRLAAHC QLAITRPELI LCSAILSMPY AYADASDTQK KSTKDIEIIN
VVGAKDLHDN RYKTQAMNTA TGLDLSYLET PQSVTSVTSQ MMHDQQLNSV IEAMTSVAGI
NARPMDNDRY SISSRGIAVT SILYDGVPTT YDTRFNYGDN LIDTAIYERV EIVRGATGLM
TGAGNPSAAI NLIRKRPTQE FMGSTSVSVG SWNNLRGMVD LSSGLNDSGS IRGRVVAAYQ
DKESFQDRYE QQRTTLYGIV ETDITDSTLL TLGVDYQDTT PEATMSGGLP LFHSDGSRTN
YDRATSTAPD WASAHTQGLN TFASLQHRFD NGWELKGTYS YGDNSLKYNV LWATGYPDPV
TNLGATAGSI AYVDGSRTQH NLDLRAQGMF ALFGQEHQLT FGWTGQRQEF ANPYYYPTAA
VPPLGDFRDP NFQYPKPQWK ETHTTGSFGE TEQSAAYVAT QLNLTDALAL LAGLRLNQWQ
TDQDNFGSMY DFKVDNELTT YFGLTYALSE QYSLYASYTD IFAPQTLQRI DASYIDPVKG
KNYEAGIKAS LMDESLDMSL SVFEIRQDNV GERTGDVLPG TTIPVYREVN GTKTQGFEFE
STGKITDDWN IYFGYTQFST DDPKGNRINT SSPRQQLKLF TTYTFSGDWN KLQLGAGVNW
QSRVYQTVNS PLGRVEVEQG SYALASLMAS YAFTEQVKLS ANVHNALDKT YYSQVGQFSQ
YQYGTPRSVS VNLDYRF
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