Gene Shewmr7_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1516 
Symbol 
ID4258266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1766491 
End bp1767528 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content51% 
IMG OID638122164 
Productferric iron reductase 
Protein accessionYP_737571 
Protein GI114047021 
COG category[R] General function prediction only 
COG ID[COG4114] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00751668 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.821381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC AAAGGGAAAC GGTACCGACC TTAGCCAAGC TTTCCAGAGG AACTCAACCT 
GATCATACCG AGCGGTGTCA TCACAACCCC TCACAGAATG TAGGCACTGT GGTCGGCGCG
CAAACAACCA ACCTAACAGC GCTAAGCCCT GCGGATTTAA CTCAAGTCGC CAAAGCGTTT
AATCAACGAC TGGCGCAGCG CGCCCCTTTT TATGCCCAGC ACTTTGTGGC AACCACCAAG
CCCCAAGGAC TCAGTTTTGA TACTTGGAGT CAGCCAGCCG TTTATCAGCA GCTTTTACTG
GATTTTGCCA AGGCCTATCC ACCTTTGGGG AAAACCTCAT CTTCCAGCCC GTCAGAAAAT
ATTCCTGAGC AGATATTGCT CAGCCATAGC TGCAACTCCA AAGCCCTGCA CTCGCTCTGG
GGACAGTGGT ATTTCGGTTT ATTAGTGCCG CCCATGTTGG AATGGATTAT TAGCGCGCCG
CACTCGCTCG CGAGCACCAT TGAGCAAATT GAGCAGCTTG ATATAGCGCC TGAGCATTTT
TATCTTCGGC CCCACGATTC GGGCAGAGTC GCAGGTTTTG AGTTTCAATT AACACCCACT
CCTAAGGTGA AAACCGCCAT AGTTAAAGCT GCCATAGTTA AAACCACGGT CTTAACGCCA
CCCCGCGAGC GACAACTTAT TAAGTGGGTT CAAAGCCATC TAATCCCTAG CGTTGAACGA
TTAACCAGTT TAAGCCCAAC ACCCGCCAAG CTGTATTGGA GCCATTTAGG CTACCTTATT
CACTGGTATT TGGGCGAAAT GGCATTGCCA GAAATTGAAT TTGAGCAGCT TAAGGCGCAG
CTGTTTAACA CAACATCCTT TGACGATGGC GAGGTTAATC CACTCTACAA CAGCATTAAT
CTGCAGCCCA CTTCTGCTGC TGACGCGGAC AATATTCGCC GCGTGTGCTG CTTAAGGTAT
CAACTCGCCA ACAGTCATCG CTGCGCCGAT TGCCCGTTAG CCACGCGCGC CCAAGCCAAA
CGTGCCGCGC AAGCTTAG
 
Protein sequence
MARQRETVPT LAKLSRGTQP DHTERCHHNP SQNVGTVVGA QTTNLTALSP ADLTQVAKAF 
NQRLAQRAPF YAQHFVATTK PQGLSFDTWS QPAVYQQLLL DFAKAYPPLG KTSSSSPSEN
IPEQILLSHS CNSKALHSLW GQWYFGLLVP PMLEWIISAP HSLASTIEQI EQLDIAPEHF
YLRPHDSGRV AGFEFQLTPT PKVKTAIVKA AIVKTTVLTP PRERQLIKWV QSHLIPSVER
LTSLSPTPAK LYWSHLGYLI HWYLGEMALP EIEFEQLKAQ LFNTTSFDDG EVNPLYNSIN
LQPTSAADAD NIRRVCCLRY QLANSHRCAD CPLATRAQAK RAAQA