Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1513 |
Symbol | |
ID | 4258263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1764673 |
End bp | 1765485 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122161 |
Product | exonuclease III |
Protein accession | YP_737568 |
Protein GI | 114047018 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00343054 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCG TTTCTTTCAA TATCAATGGA TTGCGTTCTC GCCTGCATCA ATTGCAAGCG TTAATCGACA GCCATCAGCC CGATATTATC GGCCTGCAAG AAACCAAAGT GCACGATGAA GCCTTCCCGC TCGCCGAAGT CGAGGCCATG GGCTATCACG TGCATTACCA CGGTGGCAAG GCACACTATG GCGTAGCCAT GCTCTCCAAA GCCGCCCCAA TTAAGGTGCA AAAGGGTTTT GCAACCGATG AAGAAGATGC GCAGCGCCGC ATGATTATCG GCACCTTTGC TCAGGCAAAT GGCCGTCCGT TAACTGTGTT GAATGGTTAT TTTCCTCAGG GCGAAAGCAT CGACCATCCG ACAAAGTACC CTGCTAAACG TAAGTTTTAT CAGGACTTAA TGGCGCATTT GCACGCTAAT CATAGCAACG ATGAAGATAT CGCCATCATT GGGGATATTA ATATTTCGCC CATCGATTTG GATATCGGCA TTGGTGAAGT CAACCGCAAA CGTTGGCTAA AAACTGGAAA ATGCAGTTTC CAACCCGAAG AGCGTGAATG GCTCAAGACC CTGCAGGATT GGGGATTGGT GGATACCTTC CGTCAACTAC ACCCCGACCG CAGCGAGCGT TATTCATGGT TCGATTACCG CAGCAAAGGC TTCGATGATA ACCGCGGCCT ACGCATCGAT GTGATCTTAG CCACGCCGTC ACTGGCCGCA CGTTTAATCG AATCAGACGT CGATTACGAT CTGCGCGGCA TCGATAAACC CTCAGATCAC GCGCCAATTT GGAGCACCTT TAAAGAAGCC TAA
|
Protein sequence | MKIVSFNING LRSRLHQLQA LIDSHQPDII GLQETKVHDE AFPLAEVEAM GYHVHYHGGK AHYGVAMLSK AAPIKVQKGF ATDEEDAQRR MIIGTFAQAN GRPLTVLNGY FPQGESIDHP TKYPAKRKFY QDLMAHLHAN HSNDEDIAII GDINISPIDL DIGIGEVNRK RWLKTGKCSF QPEEREWLKT LQDWGLVDTF RQLHPDRSER YSWFDYRSKG FDDNRGLRID VILATPSLAA RLIESDVDYD LRGIDKPSDH APIWSTFKEA
|
| |