| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1502 |
|---|
| Symbol | |
|---|
| ID | 4258235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1753193 |
|---|
| End bp | 1754206 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638122151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737558 |
|---|
| Protein GI | 114047008 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCACC AAATGGAAGA CTTATTAGAG CATTGGCTCC CCTTAGCCGA TGATGCGTGG
GTGCTGGCGG TGATCACTCA TATCCAAGGC TCGTCCTACC GTAAGCCCGG TGCCATGATG
TTATTCCACG AGTTTGGCCA AGGCGCGGGG ATCTTAAGTG GTGGCTGTTT AGAGGCGGAT
CTTCGCCGTC ATGCGCAGCA AGCCATGCAA TCGCAGCAGA TTGCTTGTGT CACCTACGAT
GCGACCGATG AATCCGATGC CAGCTACCGC CTAGGTTGCG GCGGTAAAGT CGATATCATG
TTGATCCCTC TACTTAAAGA AAATCATGAT CTTGGCCTAG TGGACATAGT GCAAGCGTTT
CGTAAGGGGC AGTCGGGATA CTATCAATTA CCTCTCGCAC CTGCGGGCAG CGATGCTCGC
AGTTACGCCG CGCAGTTTTA TCCGGCCCAG AGTGCCCCTT TTCCTACCGC GGATTTTCCT
AAGGCGGGCA TACTCAGCCA GCCTGAAGGG GAGGCGCTCA TCATCCCGCT CAGACCGCGA
TTTCATTTAG GGATTTTTGG TGGGGGTATC GATGCTAAGC CCGTGGCGAC GATTGCCCAC
AGTTTAGGTT GGCAGGTGAG TGTGTTTGAT ACGCGCACCG CCTACGCGAG AAGTGCTGAC
TTTCCCCATG CCCATATCGT CAAGCAAAGT GCTAATGAGG CGAGCACCCT TGTTGCATCC
TTAGATTGTG CAGTGGTTAT GCACCATAAT CTGAACTTAG ATGCGGCGGC GCTCAAAGCC
ATTCAACCCT TTGATCTTAA ATATATTGCG CTTTTAGGGC CTGCCCATCG ACGGGATAAA
GTGTTGGAGA TGGCCGAACT CAGCACAGAT TCGTTTAGTG GCTTTTTCTC GGCGCCCGCT
GGGCTTGCGC TGGGTGGCGA GTTACCTAGC GCCATTGCCT TAAGTATTTT GGCCCAATGC
CATGGGGTGC TACACGGCGC GCCATGTTCG ATTCTCGATG GGATCATGCC CTAA
|
|---|
| Protein sequence | MDHQMEDLLE HWLPLADDAW VLAVITHIQG SSYRKPGAMM LFHEFGQGAG ILSGGCLEAD
LRRHAQQAMQ SQQIACVTYD ATDESDASYR LGCGGKVDIM LIPLLKENHD LGLVDIVQAF
RKGQSGYYQL PLAPAGSDAR SYAAQFYPAQ SAPFPTADFP KAGILSQPEG EALIIPLRPR
FHLGIFGGGI DAKPVATIAH SLGWQVSVFD TRTAYARSAD FPHAHIVKQS ANEASTLVAS
LDCAVVMHHN LNLDAAALKA IQPFDLKYIA LLGPAHRRDK VLEMAELSTD SFSGFFSAPA
GLALGGELPS AIALSILAQC HGVLHGAPCS ILDGIMP
|
|---|
| |