Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1501 |
Symbol | |
ID | 4258234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1751221 |
End bp | 1752960 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122150 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_737557 |
Protein GI | 114047007 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACAA AAACAATGAT GAGTGTTGTC TTTTCCACCA TAGTCGTCAG TGCGTTGATT ACGGCGGTGT TGAGTTTTAA TGTCAAATCT AAGATTGAGC TTTTTAACAA TGCAGCGAAT ATTCGCTATC AATCCTACCA AATTGCCGAT GAATTAAGGC AAAGCTCCGA TGATTTAACG AGGCTCGCCC GAACCTATGC GGTGACTGGG GAGGATAAGT ACGAAAAAAT GTATATGGAT ATTTTGGCGA TACGTAATGG CGAAAAACCG AGGCCGGAAA AATATCACCA AATTTATTGG GATTTGGTAC TCAGTTACGG AGATAAACCT AAGCCAGACG GTGCCAGAGT CGCTATCAAA AGCCAAATGA AGGCCTTAGG GTTCTCCGAC GAGGAATTCC ATTATCTCGA GCAGGCGCAG CAAAATTCTG ATGCCTTAGT CGCCCTTGAG GTCAAGGCGA TGAATGCGGT CAAAGGGATT TTTATGGATC CTAATACCCA AACCTACAGC ATTAAAGGTG AACCAAACCT AGCTATGGCG CGAGAACTAC TGCACAGCGA GCAATACCAT AGGGAAAAGG CCAAGATCAT GCAGCCTATC GACGAGTTCT TTACTGCTTT GGATAAACGT ACCGAAGGCG AAGTGAGCAA TCGATTAGAC TCCTTGAATA TGGCACTCAA TGGCTCACAG TTTGTGTTGT TTCTGGTGAT TTTGGTCGCC GTTGGTGGCT TTGTGATTGT GAAGAGTCGC ATCGTAACGC CGATAGTGCA AACCTGCCGT GAACTACTCG ATATTCAACG TTCTAAAAAT CTGGCGCGGC GGATCTCTGT CTCGGCGCAG GGTGAAATCG GTGAAATCGT CAATCAAATC AATTTGTTTA TTTCTTCTCT CGCCAGCTCA TTAGCGACAA CGGATGGAAT TGCCAAAGAA GTTGCCGATC TGGCGAAGCA GACCAAAGCC TCCATTCAAG TGTCGCGTGA AAGCTCGAAC CGCGTCGCGA AAGAGTTAGA CGCCAGCGCG AGCGCGATGG AAGAGATGAC TACCACCTTA GTGCATGTGA GTGAGAGCAC CTCCAACGCC GAAATTCGTG CGGCAGAAAA TGAAACCCAT GTGGGCGTTG GCCAAGATAC AGTATCTGAG GCGCTCAATG CCATGGCCGT GCTTGAGAGT GAATTTACGA CTACCCAAGA TTCGATGCAG CATTTAGTGA ACGAGAGCAC CCAAGTGAGT AATGTGCTGA GCGTCATTAA GGCAATTGCC GAACAAACCA ACCTACTGGC GCTCAATGCG GCGATTGAAG CTGCGAGGGC AGGCGAACAG GGCCGAGGCT TTGCTGTGGT GGCCGATGAA GTGCGTTCAC TCGCCCAGCG GACACAGGAT TCCACTAAGG AAATCGATGA TATTGTCGCC AGTTTGCAGA ATCGAACCAA TCAGGTGGGC GGCTCTGTCA CCCAGGCGGC GAGTTTAATG CAGAAAGCCT CAGGTGAATT ACAGCGTATC GTGACTGTCT TCGATGATAT TCGCCTTAGC ACGGCGGCCA TCCATGGGAT CAATACGCAA GTCGCCGCCT CAACCGAGGA GCAATCTTTG GTGTCCAAGG ACATTGCCAC TAGCCTTGTG GTGATCCGCG ATAACTCCCG CGAGGTCTCG CAAATTATCG AGCAAATAGA GTCCACCTCC ATCAGTTTGG ATAATCAATC CCAAGCGCTA CGCACCAAAG CGGGGGAATA TCAGTTTTAA
|
Protein sequence | MNTKTMMSVV FSTIVVSALI TAVLSFNVKS KIELFNNAAN IRYQSYQIAD ELRQSSDDLT RLARTYAVTG EDKYEKMYMD ILAIRNGEKP RPEKYHQIYW DLVLSYGDKP KPDGARVAIK SQMKALGFSD EEFHYLEQAQ QNSDALVALE VKAMNAVKGI FMDPNTQTYS IKGEPNLAMA RELLHSEQYH REKAKIMQPI DEFFTALDKR TEGEVSNRLD SLNMALNGSQ FVLFLVILVA VGGFVIVKSR IVTPIVQTCR ELLDIQRSKN LARRISVSAQ GEIGEIVNQI NLFISSLASS LATTDGIAKE VADLAKQTKA SIQVSRESSN RVAKELDASA SAMEEMTTTL VHVSESTSNA EIRAAENETH VGVGQDTVSE ALNAMAVLES EFTTTQDSMQ HLVNESTQVS NVLSVIKAIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLAQRTQD STKEIDDIVA SLQNRTNQVG GSVTQAASLM QKASGELQRI VTVFDDIRLS TAAIHGINTQ VAASTEEQSL VSKDIATSLV VIRDNSREVS QIIEQIESTS ISLDNQSQAL RTKAGEYQF
|
| |