| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1498 |
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| Symbol | |
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| ID | 4258231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1746230 |
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| End bp | 1748428 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122147 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_737554 |
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| Protein GI | 114047004 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACTCTT GTCCGCTTTG GGCTAAATTA CACTGTAATT ATATCCAGTA TTTATATCCA
GTATTTAATG TAGATATGAT CCTCTATATT GCTGAAAAAC CAAGCCTAGG GCGTGCAATC
GCCGATGTGC TGCCTAAACC CCACAAAAAA GGTGACGGGT TTATCGAAGA TGCTAACGGT
AACTGTGTGT CTTGGTGTGT GGGGCACTTG CTCGAACAGG CTGAGCCCGA TGCCTATAAT
CCCGAGTTTA AATCGTGGAA GTTTGAGCAT TTACCCATAG TGCCAGAGAA GTGGCAGCTT
AAACCTAAGG CCGCGACCCG CAGCCAACTC ACAGTACTTA AAAAGCTGGT GAAGCAGGCC
GATACTTTAG TGAATGCGGG TGATCCCGAC AGGGAAGGGC AGTTATTGGT TGATGAAGTG
ATCGCCTATT TGGGCGTGAC GGGCGATAAA TTACAGCAAA CGCAGCGACT CCTTATTAGC
GACTTAAACC CGCAGGCGGT GAAACGTGCC TTGTCACAAC TCCGCAGTAA TCGTGAGTTT
ATTCCTTTGT CGACCTCGGC ACTTGCCAGA AGCCGCGCCG ATTGGCTCTA TGGCATGAAT
ATGACGCGGG CCTACACTAT TCAAGGGAAA AAGGTCGGCT ATCAGGGCGT ACTATCGGTC
GGCCGAGTAC AGACCCCGCT GCTTGGGCTT ATTGTGCGCC GCGATGAGGA AATCGCGAAT
TTCCAATCTA AGCCTTTTTA TGAGGTTTTG GCTCAATTAG TGACCGACAA AGATCAGGCT
TTCACGGCTA AGTGGCAACC CAGTGAAGCC TGCTTGCCCT ATATGGATGA GGAAGGGCGC
GTGCTTGCTA AGGGCCTAGC GCAAAATGTA GTGCGGCGGA TCACCGATAA ACCTGCCAAA
GTGACCCAGT TAAGCACTAA GGATAAGCAG CAGAATCCGC CTTTACCCTA TAGTTTATCG
GCGCTGCAAA TCGATGCCGC CAAGCGCTTC GGCATGAGCG CAAAGGACGT GCTCGATACC
TGCCAGAGCT TATACGAGCG CCATAAGCTA ATCACTTATC CACGCTCAGA CAGTCGTTAT
TTGCCCACCG AGCAGCATGG GCTTGCAAGT GGGGTATTAG CGGCCATTAC GGGCGGTGCG
CCCGAGTTAG TCGCACATGC TGAGGCGCCC AATCCTCGGC TTAAATCTAA GGCGTGGGAT
GATAAAAAAG TTGATGCTCA CCACGCCATT ATTCCAACGG AAAAACAGCC CAATCTAGGT
GGTTTAAGCC AGCGGGAAAG GCAGCTTTAT CTGCATATTG CTCGACAGTA TTTGGCGCAG
TTTTACCCCG CCTATTGCTA CAGTGAAACC GCGGTCGAAG TGACGATCGA AGGTGGCCTT
TTTAAAACTA AGGCAAAACA GGATAAGTCT CTCGGTTGGA AACAACTGTT TTCTAGAGAA
GAGAACGAAC GAAAGGACGC ATCATCCGCA GCGAGTTTTG CGCAAGGCGA CAAGGACACA
GAGGAAGGGG AATATCTTGG TCAGTTACCG CCTCTTACCT TAGGACAAGT TCTTCATTGT
CACCAAGGTG AATTGGTCGA GAAGCAAACT CAACCTCCCA AAGCCTTTAC CGATGCGACC
TTGCTGAGTG CGATGACGGG GATTAACCGT TATGTGACTG ACCCAGAGAT CCGCAAAATT
TTAAAGGAAA CCGATGGCTT AGGTACGGAA GCGACTCGCG CAGGCATTAT TGAACTGCTG
TTTAAACGGG GCTTTATTCA GCGTCAGGGC AAGTCGATTG TGGCAACTGA GGTGGGTAAG
GGCTTAATCA ATAGCTTACC CCTTAGCGCC ACGACACCCG ATATGACTGC GTTGTGGGAG
GCAAGTCTAA ACGGCATCTG CCATAAAGAA ATCTCATATC AAGGCTTTAT GCAGCCTCTG
CTGGGGACGC TAACTAACTT AATCGAAAAT GCGGGCGCTC AATTACCGTC TGCCTTCAAT
GGCTTAAAAG GGCAGGGCTT TAAGCGTGCA GCAACTAAAA AGTCCGGCTA TCGAAAAGCA
GGAGGTAAAG GCGCTGGATG GAAAAAATCC GGCACTAAAA ACGCGGCAGT GAGAAGCTCG
GCCGCTAAAA CTACCGCGGC TAAATCGACG GTCTCGACAT CCGGTACGTC CACCATTACG
CCTAGACGGC GAGTGAGTAA AGCGCCTGCT CAAGCCTGA
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| Protein sequence | MHSCPLWAKL HCNYIQYLYP VFNVDMILYI AEKPSLGRAI ADVLPKPHKK GDGFIEDANG
NCVSWCVGHL LEQAEPDAYN PEFKSWKFEH LPIVPEKWQL KPKAATRSQL TVLKKLVKQA
DTLVNAGDPD REGQLLVDEV IAYLGVTGDK LQQTQRLLIS DLNPQAVKRA LSQLRSNREF
IPLSTSALAR SRADWLYGMN MTRAYTIQGK KVGYQGVLSV GRVQTPLLGL IVRRDEEIAN
FQSKPFYEVL AQLVTDKDQA FTAKWQPSEA CLPYMDEEGR VLAKGLAQNV VRRITDKPAK
VTQLSTKDKQ QNPPLPYSLS ALQIDAAKRF GMSAKDVLDT CQSLYERHKL ITYPRSDSRY
LPTEQHGLAS GVLAAITGGA PELVAHAEAP NPRLKSKAWD DKKVDAHHAI IPTEKQPNLG
GLSQRERQLY LHIARQYLAQ FYPAYCYSET AVEVTIEGGL FKTKAKQDKS LGWKQLFSRE
ENERKDASSA ASFAQGDKDT EEGEYLGQLP PLTLGQVLHC HQGELVEKQT QPPKAFTDAT
LLSAMTGINR YVTDPEIRKI LKETDGLGTE ATRAGIIELL FKRGFIQRQG KSIVATEVGK
GLINSLPLSA TTPDMTALWE ASLNGICHKE ISYQGFMQPL LGTLTNLIEN AGAQLPSAFN
GLKGQGFKRA ATKKSGYRKA GGKGAGWKKS GTKNAAVRSS AAKTTAAKST VSTSGTSTIT
PRRRVSKAPA QA
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