Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1491 |
Symbol | truA |
ID | 4257768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1738621 |
End bp | 1739406 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122140 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_737547 |
Protein GI | 114046997 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.125203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGAAGTGGTT ATTTCGGTTG GCAGCGTCAG GCCGAAGTCG ATTCAGTACA AGGGCAATTA GAACAAGCCT TATCTAAGGT GGCGAATGAA CCCATCAGCT TGTTCTGTGC GGGGCGAACC GATGCCGGCG TTCATGCGAC TGGGCAGGTG GTGCATTTCG AGACTAACGC CATACGCAAC GAAGGCGCGT GGACCTTAGG GGTGAATGCC AATTTACCCG ATAATATCGC CGTTCGTTGG GCTAAAGAGG TGGATGACAG TTTCCATGCC CGCTTTTCAG CCACGGCCAG ACGTTATCGC TATGTGATTT ACAATCATAA TTTTCGCCCC GGGATCCTAC GTCACGGCGT GAGCCATTAC CACGGTGATA TCGACGCTGA TAAAATGCAT GTTGCAGCGC AGGCGCTGCT CGGTGAGCAG GACTTTACCA GTTTTCGCGC GATTCAATGC CAATCGAAAA CCCCGTTTCG CAATGTGCAC AGCGTCAAAG TGACGCGTCA GGGCATGTAT GTGATTGTCG ATATTTCTGC TAACGCCTTC TTACACCATA TGGTGCGAAA CATTGTCGGC TCCCTGCTGG AAATTGGCCT AGGCAACCAG CCGCTGACTT GGATGGCGGA TTTACTGGCC CTTAAAGACC GAAATCAAGC GGCGGCCACC GCCAAACCCA ATGGACTCTA TTTAGTCGAT GTGACCTATC CCGAGCAGTA TCAACTGCCT AAGTTGGCTT TAGGGCCATT GTTTATGCTG GATTAA
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Protein sequence | MRIALGIEYD GSGYFGWQRQ AEVDSVQGQL EQALSKVANE PISLFCAGRT DAGVHATGQV VHFETNAIRN EGAWTLGVNA NLPDNIAVRW AKEVDDSFHA RFSATARRYR YVIYNHNFRP GILRHGVSHY HGDIDADKMH VAAQALLGEQ DFTSFRAIQC QSKTPFRNVH SVKVTRQGMY VIVDISANAF LHHMVRNIVG SLLEIGLGNQ PLTWMADLLA LKDRNQAAAT AKPNGLYLVD VTYPEQYQLP KLALGPLFML D
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