Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1482 |
Symbol | |
ID | 4257759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1725665 |
End bp | 1726834 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638122131 |
Product | major facilitator transporter |
Protein accession | YP_737538 |
Protein GI | 114046988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.51867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.336975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACAA TCTCTAGCAC AAGCCAGCAG TTACGCTGGC TATGTGCCTG TTATTTTTTC TTCTTTTCAA TTCTCGGCAC TATGATCCCT TACCTTGGGG TCTTCTTCGA AAACCGTGGA TTTAACCCTC AAGAAATCGG TTTTTTGCTG GCGATTTTAA TGGCGACCCG AATCGTGGCA CCCAATGTGT GGGCTAAGGT GGCCGATCGC ACTGGCATGC GCTCCGAATT GGTGAAGATG GGCGCGGGCG CCGCGATGCT GGCGTATTTG AGTTTCTTCT ACCACGGTGG CTTTGTGTAT ATGGCGCTGA GCCTTGCGCT GTATACCTTC TTCTGGAACG CGATTTTGGC ACAGCTTGAG GTGATCACCC TCGAAACCTT AGGTGAAAAT GCCAGCCGCT ATGGACAAAT CCGCAGTTTT GGCAGCATTG GCTATATCTG CTTGGTGGTC GGTGCCGGTT TTGCCATCGG CCAATGGGGC ACTGAGGTGT TGCCTTATAT TGGTTTAGCC TTGTTTACAG GGATGCTGGT CAGCGCCTTG CCGTTGCCCG CGAATCGTGC CGTGCGCCCT CAAGGGCAGG AGCGGCAGCC GCTCAAATGG ACTAAGCCCA TTCTGTGGTT CATGGTATCG GCGATGTTAT TACAGATGAG CGCTGGGCCT TTTTACGGTT TCTTTGTGCT CTATCTTAAG CAGGCGGGTT ACACTGAAGC GGCCGCGGGG ATTTTTGTTG CCTTAGGGGC AATGGCCGAA ATCGTGATGT TTATGTTTGC GCCTCGCTTG CTTGGACGGT ATGGCGTCAA TACCTTGCTT GTCGTCAGTA TTGCTATGAC TGCCGTGCGT TGGTTGCTGG TCGCCTTCGG CGTTGAGAGC ATGTTATTAC TGGGCTTAAG CCAAGTGCTG CATGCGTTCA CCTTCGGTTT GACCCATGCG GCCTCGATTC AGTTTGTGCA CCGTCATTTT GATGCCAGTC ATCGCAGTCA AGGACAAGCC CTGTATGCCA GCTTAAGCTT TGGGGTTGGC GGCGCACTCG GAACGTGGAT TTGCGGTTAT ATCTGGGGGG ATGGTAGCGG CGCTGTATGG TCTTGGGTAT TTGCGGCGGC CTGTGCCTTT GCGGCCATGT TAGCGGTATT TTTGATCCCT AAGGATAGGC CGCAAGCAGT TGCTGCATAA
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Protein sequence | MPTISSTSQQ LRWLCACYFF FFSILGTMIP YLGVFFENRG FNPQEIGFLL AILMATRIVA PNVWAKVADR TGMRSELVKM GAGAAMLAYL SFFYHGGFVY MALSLALYTF FWNAILAQLE VITLETLGEN ASRYGQIRSF GSIGYICLVV GAGFAIGQWG TEVLPYIGLA LFTGMLVSAL PLPANRAVRP QGQERQPLKW TKPILWFMVS AMLLQMSAGP FYGFFVLYLK QAGYTEAAAG IFVALGAMAE IVMFMFAPRL LGRYGVNTLL VVSIAMTAVR WLLVAFGVES MLLLGLSQVL HAFTFGLTHA ASIQFVHRHF DASHRSQGQA LYASLSFGVG GALGTWICGY IWGDGSGAVW SWVFAAACAF AAMLAVFLIP KDRPQAVAA
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