Gene Shewmr7_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1482 
Symbol 
ID4257759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1725665 
End bp1726834 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content53% 
IMG OID638122131 
Productmajor facilitator transporter 
Protein accessionYP_737538 
Protein GI114046988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.51867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.336975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAA TCTCTAGCAC AAGCCAGCAG TTACGCTGGC TATGTGCCTG TTATTTTTTC 
TTCTTTTCAA TTCTCGGCAC TATGATCCCT TACCTTGGGG TCTTCTTCGA AAACCGTGGA
TTTAACCCTC AAGAAATCGG TTTTTTGCTG GCGATTTTAA TGGCGACCCG AATCGTGGCA
CCCAATGTGT GGGCTAAGGT GGCCGATCGC ACTGGCATGC GCTCCGAATT GGTGAAGATG
GGCGCGGGCG CCGCGATGCT GGCGTATTTG AGTTTCTTCT ACCACGGTGG CTTTGTGTAT
ATGGCGCTGA GCCTTGCGCT GTATACCTTC TTCTGGAACG CGATTTTGGC ACAGCTTGAG
GTGATCACCC TCGAAACCTT AGGTGAAAAT GCCAGCCGCT ATGGACAAAT CCGCAGTTTT
GGCAGCATTG GCTATATCTG CTTGGTGGTC GGTGCCGGTT TTGCCATCGG CCAATGGGGC
ACTGAGGTGT TGCCTTATAT TGGTTTAGCC TTGTTTACAG GGATGCTGGT CAGCGCCTTG
CCGTTGCCCG CGAATCGTGC CGTGCGCCCT CAAGGGCAGG AGCGGCAGCC GCTCAAATGG
ACTAAGCCCA TTCTGTGGTT CATGGTATCG GCGATGTTAT TACAGATGAG CGCTGGGCCT
TTTTACGGTT TCTTTGTGCT CTATCTTAAG CAGGCGGGTT ACACTGAAGC GGCCGCGGGG
ATTTTTGTTG CCTTAGGGGC AATGGCCGAA ATCGTGATGT TTATGTTTGC GCCTCGCTTG
CTTGGACGGT ATGGCGTCAA TACCTTGCTT GTCGTCAGTA TTGCTATGAC TGCCGTGCGT
TGGTTGCTGG TCGCCTTCGG CGTTGAGAGC ATGTTATTAC TGGGCTTAAG CCAAGTGCTG
CATGCGTTCA CCTTCGGTTT GACCCATGCG GCCTCGATTC AGTTTGTGCA CCGTCATTTT
GATGCCAGTC ATCGCAGTCA AGGACAAGCC CTGTATGCCA GCTTAAGCTT TGGGGTTGGC
GGCGCACTCG GAACGTGGAT TTGCGGTTAT ATCTGGGGGG ATGGTAGCGG CGCTGTATGG
TCTTGGGTAT TTGCGGCGGC CTGTGCCTTT GCGGCCATGT TAGCGGTATT TTTGATCCCT
AAGGATAGGC CGCAAGCAGT TGCTGCATAA
 
Protein sequence
MPTISSTSQQ LRWLCACYFF FFSILGTMIP YLGVFFENRG FNPQEIGFLL AILMATRIVA 
PNVWAKVADR TGMRSELVKM GAGAAMLAYL SFFYHGGFVY MALSLALYTF FWNAILAQLE
VITLETLGEN ASRYGQIRSF GSIGYICLVV GAGFAIGQWG TEVLPYIGLA LFTGMLVSAL
PLPANRAVRP QGQERQPLKW TKPILWFMVS AMLLQMSAGP FYGFFVLYLK QAGYTEAAAG
IFVALGAMAE IVMFMFAPRL LGRYGVNTLL VVSIAMTAVR WLLVAFGVES MLLLGLSQVL
HAFTFGLTHA ASIQFVHRHF DASHRSQGQA LYASLSFGVG GALGTWICGY IWGDGSGAVW
SWVFAAACAF AAMLAVFLIP KDRPQAVAA