| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1479 |
|---|
| Symbol | |
|---|
| ID | 4257756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1722817 |
|---|
| End bp | 1723410 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638122128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737535 |
|---|
| Protein GI | 114046985 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.311566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAA ACATTGTAAC TGAACTCTAT TCAGAAACCA TAGGATTCAA TAGAATACCC
GCCATGAATA AAGACGATGA CAAAGAAGGC ATGGCGATGT TTTCGGCGCT AATCGAGGGG
ATAAAACCTA TCACCCAAGA TAAGCGGCAT TTTCGCGCGC CCCTAAAAAC CAAACAAGAA
ATTGAACTAA AAGAGCAACA GTTGCATGCT AACAGTTATT TCTCAGATAC TTATCAACCG
CTACTCCCCG TTCAAGGGCC GATGCGCTGG CTCGATGAAG GAGTCGATAG CCTCGAGCTT
AAACGCTTAA GACGCGGCGA TTATCAGCCG GATTTGTTGC TGGACTTGCA CGGTTACCGC
CAATCCGAGG CTAAACTCGA GCTCGCGGCG CTCATTCAAG CCTGTGTAAA ACAGCAAAGC
CAATGTTGTT GTGTGATGCA CGGTTACGGC ACTGGCATAC TAAAACAGCA GGTGCCTATG
TGGTTGGTGC AACATCCGAT GGTAAAAGCG TTTCATCAGG CCCCCAAGGA ATGGGGTGGC
GATGCGGCGC TGCTGGTGCT TATCGATATT GGCGATCAAC CACATCGACG TTAA
|
|---|
| Protein sequence | MFTNIVTELY SETIGFNRIP AMNKDDDKEG MAMFSALIEG IKPITQDKRH FRAPLKTKQE
IELKEQQLHA NSYFSDTYQP LLPVQGPMRW LDEGVDSLEL KRLRRGDYQP DLLLDLHGYR
QSEAKLELAA LIQACVKQQS QCCCVMHGYG TGILKQQVPM WLVQHPMVKA FHQAPKEWGG
DAALLVLIDI GDQPHRR
|
|---|
| |