Gene Shewmr7_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1478 
Symbol 
ID4257755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1722280 
End bp1722750 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content46% 
IMG OID638122127 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_737534 
Protein GI114046984 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.49019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTAT TTTTGATGCG ACATGGTGAC GCTGGATTTA ATGCTCAGTC GGATAGGGAC 
AGAACGCTTA CCGATTTAGG AAGACACCAT ACAGTGTTAA TGAGTAACTG GTTAGCCCGA
AGTGTCAGCG ATTTTGATCT TGTTTTGGTT AGCCCTTATT TACGTGCTCA GCAAACTTGG
CAAGAACTGA GTCAACATTT CCCCGAACCC CGTAAATGGC TAGTTGTTGA TGATTTAGTG
CCTTCAGGCG ATCCTGCTAA TGTGGCTGCT TTAATTGTTG CCTATGCCGA GTTGTATAAG
GCTGATAAAG TGCTGGTGAT TTCCCACATG CCACTCTTAG GCTATTTGGT CAGCGAGTTA
GTTGCGGGTG TCGAGCCGCC CTTATTTGCT ACCTCTGGAA TTACTCTGAT AGATAAACAT
GCCGAGCAGG CTTGCATTGT TTGGCAACAT GCGCCCCACA GCATTAGTTA A
 
Protein sequence
MQLFLMRHGD AGFNAQSDRD RTLTDLGRHH TVLMSNWLAR SVSDFDLVLV SPYLRAQQTW 
QELSQHFPEP RKWLVVDDLV PSGDPANVAA LIVAYAELYK ADKVLVISHM PLLGYLVSEL
VAGVEPPLFA TSGITLIDKH AEQACIVWQH APHSIS