Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1471 |
Symbol | |
ID | 4255633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1708631 |
End bp | 1709587 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638122120 |
Product | ATPase |
Protein accession | YP_737527 |
Protein GI | 114046977 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.928753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00766173 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTTTGA GTCGCTTCCA CGCATTACGC ACTTACCTAA ATAAGGTTGT TTTAGGGCAG CCAGTTTTGA CCGAAAACCT GCTCATTGCC CTCATTGCCA ATGGCCATTT ATTAGTAGAA GGCCCACCAG GTCTTGCTAA AACCCGTGCA GTTAAAGCCC TCTGCGATGG TGTGGAAGGG GATTTCCACC GGATCCAATT TACCCCTGAC CTACTGCCAG CCGACCTTAC GGGTACGGAT ATCTATCGCT CACAAACTGG TACCTTCGAA TTTGAAGCGG GCCCGATTTT CCACAACCTG ATCCTCGCCG ATGAAATCAA CCGCGCCCCA GCTAAAGTGC AGTCGGCGTT ATTAGAGGCC ATGGCCGAAG GTCAAGTGAC CGTGGGTAAA AACAGTTATA AGTTGCCGCC ACTCTTCCTC GTGATGGCGA CACAAAACCC CTTAGAAAAC GAAGGCACTT ATCCGCTGCC CGAAGCCCAG CTCGACCGCT TTTTAATGCA CCTGAATTTA GATTATCCAA GTGGTGACAC TGAAATCGAG ATCCTGCGCC AATCCCGCCA AGAAGCACTC ACCCATGAGT TGCCGACTGC GGAGCCAATT GCACAGGCCG ATATTTTTGC CGCCCGAGAT GAAGCGATGG AAATCTATCT GGCCGAGCCG CTAGAGAAAT ACATAGTCGA AATCATTATG GCGACCCGCC AACCCGCCCG TTACAGCGAC GAGCTGGCAA AATGGTTAGA GTACGGTGTG AGTCCGCGTG CGACGATTTC GCTGGAGCGC TGCGCCCGCG CCAGAGCTTG GTTACACGAG CGCGATTTTG TCTCTCCCGA GGATATTCAA GCCGTTGCCC CCAATGTGTT AAGACACAGA CTGCTGCTGA GTTATCAAGC ACAGGCCGAG GGTGTCAGCC GCGATCAAGT GATCAACCAT ATTTTGACTC AGGTCGCCGT CCCTTAA
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Protein sequence | MPLSRFHALR TYLNKVVLGQ PVLTENLLIA LIANGHLLVE GPPGLAKTRA VKALCDGVEG DFHRIQFTPD LLPADLTGTD IYRSQTGTFE FEAGPIFHNL ILADEINRAP AKVQSALLEA MAEGQVTVGK NSYKLPPLFL VMATQNPLEN EGTYPLPEAQ LDRFLMHLNL DYPSGDTEIE ILRQSRQEAL THELPTAEPI AQADIFAARD EAMEIYLAEP LEKYIVEIIM ATRQPARYSD ELAKWLEYGV SPRATISLER CARARAWLHE RDFVSPEDIQ AVAPNVLRHR LLLSYQAQAE GVSRDQVINH ILTQVAVP
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