| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1467 |
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| Symbol | |
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| ID | 4255629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1703860 |
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| End bp | 1705923 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122116 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_737523 |
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| Protein GI | 114046973 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00291188 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGC ATTTTATTCG TCCAGAATGG TTACTCGCCC TATTGCCACT CGCCATCATC
CTGTGGGCGC TATGGCGCCA ACACCAGAGC AACAGCGCCT GGAATCGCTA TATTGCACCG
CACTTGGCCA AAATATTGGT CACAGAGGGC ACGCAAAAAT CCCGTCGACC ACTGCATATA
TTGGCTTTCA CTTGGGTGAT TGCCACCTTG GCCTTAGCGG GCCCCGCCCT CAATAAGCAA
ACCTTGCCCG TTTTCGCCGC CGAGCAAGGC CGAGTGTTGG TGATGGACAT GTCTGTCTCC
ATGTTTGCCA CCGATCTGGC GCCCAACCGC TTAACCCAAA CCAAGTTTAG AGCGACGGAT
TTGCTCCGCG GCTTAAAAGA AGGCGAAACT GGCCTGATTG CCTTCGCCGG CGATGCCTTT
ACCATAAGCC CGCTCACCCG AGACACGGGC ACGCTGCTTA ATTTATTACC CACGTTAAGC
CCTGACATTA TGCCAGTGTT GGGCTCAAAC CTAGCGGCCG CGCTAACCCA AGCTAAAAAT
CTACTGGCAC AGGGCGGGCA TCTACGGGGC GATATTATTG TGATGACAGA TGGCATCACC
CCGAGGCAAT TCGATGAGGC TAACTCTGCC TTAGCCGGTA GCCAATATCG CCTCGCGATC
ATGGGATTTG GTAGCCCCCA AGGCGCGCCC ATCCGCTTAC CCGATGGCCA ATTACAGCGT
GACAGCAGCA ATGAAGTCGT TGTCGCCAAA ACCGACTTTG GCTTACTGCA AAAATTAGCC
GATAACCATA ATGGCATCAT GATCCCCAAT CGTGCCGATG GTCAGGATTT AGCACAGTTG
CAACATTGGT TGAGTGACAG TGGCGATGCC AAAGCCACGG ATCTCGATGG AGAAACCTGG
CAAGATCTCG GCCCTTACCT CGCCTTACTC TTACTCATCC CTGCCCTGCT GAGCTTTAGG
CAAGGCATGC TCGCTAACTG GCTGCTGATG GGATTGGGCG GTCTATTGCT CAGCGCTGCG
CCGCAAAGCG CCCATGCCAG CGCATGGGAC TCACTCTGGC ACACCCAAGA GCAACAGGCG
ATGCAGGCCT ATCAAGCTGA GGATTACGCC AATGCCGCAC AAAAATTCGA GACGCCCCAA
TGGCAAGGCG CGGCGCAGTA CAAGGCGGGC GAGTACGAAC AGGCGCTAAA AAGCTTTGAG
CAAGATAGCT CAGCCAATGG CCTTTACAAC CAAGGCAACG CGCTGATGCA ACTCGGTAAA
CCCGACAAAG CCAAGGAGCG TTATCAGGCC GCACTCGACA AGCAGCCCGA GTTCCCACAG
GCCAAGGCCA ACCTTGAGTT AGCAGAGAAA TTGCTGAACC AGCAGCAGTC GCAGCAAAAT
GCTGACAATC AAGATAAACA GTCTCAAGGC GATCAAAACC AACAGGGACA GGACCAGAAC
GATCAGCAGC AGGGGCAAAA CCAACAGCAG GGAGATCAAC AATCCTCGCA AAACGACCAA
GCTCAAGATC AGTCTCAAGA GCAGCAGTCC CAACAGCAAA ATAATTCTGA TCAAGCGGAC
AAAAAACCAT CGCAGGAACA AAGTACCTCA TCAGAGCAGA ATGATCCTGA GCAAGGCGCG
CAGGATAAAC AGCAAGCGAG TGATGAAAAC GCCAAGCAAG ATCAGCAAGA TGCACAGCAG
GAACAACAGC AGGCCGAGCA ACAAGCCAAT CAGCAAAACG GCGCCGATAA CAATGCTGAA
GATAAAGAAG ATCCAGCCAG CAACGAGGCA AAAATGCAGG CAAAGGTCGA GGATGATAAG
TCCAAAGCCA AGCAAGAACA GCAACAGGCC GTAGCGCAAA AAGCGGATAA AGAGAAACAG
GCGCAGGCGG ATAAAAAACC AGATACCGCT GTTGAGTCTG TTGAAGCGCC GCCGAGTAAC
AGCGAGCCTT TACCCGCGGA GATGCAGCGA GCACTGCGGG GCGTGAGTGA AGATCCACAG
GTGTTGCTGC GTAACAAGAT GCAACTCGAA TATCAAAAAC GCCGTCAAAA TGGCCAAATA
TCAAGGGATA ACGAACAGTG GTGA
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| Protein sequence | MSLHFIRPEW LLALLPLAII LWALWRQHQS NSAWNRYIAP HLAKILVTEG TQKSRRPLHI
LAFTWVIATL ALAGPALNKQ TLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQTKFRATD
LLRGLKEGET GLIAFAGDAF TISPLTRDTG TLLNLLPTLS PDIMPVLGSN LAAALTQAKN
LLAQGGHLRG DIIVMTDGIT PRQFDEANSA LAGSQYRLAI MGFGSPQGAP IRLPDGQLQR
DSSNEVVVAK TDFGLLQKLA DNHNGIMIPN RADGQDLAQL QHWLSDSGDA KATDLDGETW
QDLGPYLALL LLIPALLSFR QGMLANWLLM GLGGLLLSAA PQSAHASAWD SLWHTQEQQA
MQAYQAEDYA NAAQKFETPQ WQGAAQYKAG EYEQALKSFE QDSSANGLYN QGNALMQLGK
PDKAKERYQA ALDKQPEFPQ AKANLELAEK LLNQQQSQQN ADNQDKQSQG DQNQQGQDQN
DQQQGQNQQQ GDQQSSQNDQ AQDQSQEQQS QQQNNSDQAD KKPSQEQSTS SEQNDPEQGA
QDKQQASDEN AKQDQQDAQQ EQQQAEQQAN QQNGADNNAE DKEDPASNEA KMQAKVEDDK
SKAKQEQQQA VAQKADKEKQ AQADKKPDTA VESVEAPPSN SEPLPAEMQR ALRGVSEDPQ
VLLRNKMQLE YQKRRQNGQI SRDNEQW
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