Gene Shewmr7_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1461 
Symbol 
ID4255623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1697131 
End bp1697517 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID638122110 
Producthypothetical protein 
Protein accessionYP_737517 
Protein GI114046967 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000145947 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000259601 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAAAG TCATTGGACT TGGTGGTATT TTCTTTAAAA GTACTGATCC CGTCGCGTTA 
GCCACTTGGT ATCAAAACCA TCTGCAAATA CCAATTGAAA ACTGGGGCGG CGCCGCCTTT
TATCACAACG ATAAACCGAC GCCCGGTTAC CATGTGTGGA CCCCTTTCGA CCATAACACC
AGCTATTTTG CCCCGACCGA CAAAAGCTTT ATGTTTAATT TTATCGTTGA CGATCTGGAG
CAGGCCCTAC AGCAAGTCAC TCAGGGCGGC GGCGAACAAA TTGGGGAGAT TGAAGACTCG
GAATTTGGCC GTTTCGGTTG GTTTATCGAC CCCGATGGCA ATAAAGTCGA ATTATGGCAG
CCAAGCCCTA TCCCTCCCGT TAACTAA
 
Protein sequence
MAKVIGLGGI FFKSTDPVAL ATWYQNHLQI PIENWGGAAF YHNDKPTPGY HVWTPFDHNT 
SYFAPTDKSF MFNFIVDDLE QALQQVTQGG GEQIGEIEDS EFGRFGWFID PDGNKVELWQ
PSPIPPVN