Gene Shewmr7_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1454 
Symbol 
ID4256355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1687518 
End bp1688063 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID638122103 
ProductYaeQ family protein 
Protein accessionYP_737510 
Protein GI114046960 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0751481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000381127 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCTCA AAGCGACCGT GTTTAAGGTC AATCTTCAGA TCGCCGATAT GGACCGAGGT 
TATTATCAAG ATCATCAGCT GACATTAGCG CAGCATCCCT CCGAGACCGA TGGCCGCATG
ATGGTGCGTT TGTTGGCCTT TATCCTGAAC GCTTCCGAGA CCTTAAGTTT TACTAAGGGA
TTGTGCGTCG ACGATGAGCC AGAACTCTGG GACAAGAGTC TCTCCGGTGA AGTGGACCTG
TGGATTGAGT TTGGCCAAGC CGATGAGAAA TGGCTGCGTA AGGCGAGCGG TCGCGCAAAA
GCGGTGCAGC TGTTTACTTA CGGCGGACGT AGTGTCCCTA TTTGGTGGAA GCAGAATCAA
GCGGCACTAG AGCGTTATAA AAACCTTAAA GTGTGGAATA TTGCCGAAGA GTCGGTGACG
GCGATGGAGG CCTTAGTGAG CCGCACTATG TCGCTGCAGG CGTCCATCAG TGAAGGGCAA
GTCTGGTTAT CGGATAACGA GCACAGCGTG CTTATCGAGC CAGAGATGCT GAAAGATGAC
CAATAA
 
Protein sequence
MALKATVFKV NLQIADMDRG YYQDHQLTLA QHPSETDGRM MVRLLAFILN ASETLSFTKG 
LCVDDEPELW DKSLSGEVDL WIEFGQADEK WLRKASGRAK AVQLFTYGGR SVPIWWKQNQ
AALERYKNLK VWNIAEESVT AMEALVSRTM SLQASISEGQ VWLSDNEHSV LIEPEMLKDD
Q