| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1452 |
|---|
| Symbol | |
|---|
| ID | 4256353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1686126 |
|---|
| End bp | 1686485 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638122101 |
|---|
| Product | rhodanese domain-containing protein |
|---|
| Protein accession | YP_737508 |
|---|
| Protein GI | 114046958 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0322334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00868672 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAT CCAGTGCTTT TTCAGCCCTT GTCGAATCGA TTCGGTCCCA TGTCGTTGAA
GTGAGTATTG AGGCCTACCA AGCCGATGAT ACTTGGGTAT TGATTGATGT CCGTGAAGAT
AACGAGTGGC TACAGGATCA TCTGCCGCAG GCGAAACATA TGAGCCGCGG CATTATTGAG
CGCGATATTG AACAGCGCTT CCCCGATAAA CATACGCCTC TGCTGCTCTA TTGCGCGGGC
GGCGCACGCT CTGTACTGGC GGCCAGCAGT TTGCAACTGA TGGGTTACCA AAGGGTGGCC
TCCTTGATTG GGGGTTATAA AGGCTGGATC CAACGCCAGC TGCCCGTGGT GCAAGATTAA
|
|---|
| Protein sequence | MNPSSAFSAL VESIRSHVVE VSIEAYQADD TWVLIDVRED NEWLQDHLPQ AKHMSRGIIE
RDIEQRFPDK HTPLLLYCAG GARSVLAASS LQLMGYQRVA SLIGGYKGWI QRQLPVVQD
|
|---|
| |