| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1440 |
|---|
| Symbol | |
|---|
| ID | 4258556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1674965 |
|---|
| End bp | 1676344 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638122089 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_737496 |
|---|
| Protein GI | 114046946 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0866733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATA TTCATCGCCG CCATTTTCTA AAAGCCGCGG GCGCCGTTAC CGCAGGTCTG
GTTACGGCCA ATATTGCCCT CAATGCCAAC GCCAGCAGCG TTGCCCCTAA ACCCCGCGTA
GGAAAATCCG TTATCGGACT CATCGCCCCA AAAATGGAGC TGGTTAGAGT CGGTTTTATC
GGTGTGGGAG AGCGGGGTTT TAGCCATGTC GAACAATTCT GTCACTTAGA AGGCGTAGAA
CTTAAAGCCA TTTGTGATAC GCACCAAGCC GTTATCGATA GAGCCGTTGA GCATATCGTT
AACCAAAACC GGCCAAAACC TGCCGTCTAC ACGGGGAATG ATCTCAGCTA TCGCGAGCTG
TTAAACCGCG ATGATATCGA TATTGTGATT ATTTCGACCC CATGGGAATG GCACGCTCCC
ATGGCCATAG ATACCATGGA AAGTGGTAAG CACGCCTTTG TGGAAGTGCC ATTAGCACTG
ACAGTGGAAG AATGCTGGCA GCTTGTCGAC ACCGCCGAAC GCACTCAGAA AAACTGCATG
ATGATGGAGA ACGTCAATTA CGGCCGCGAA GAATTGATGG TGCTCAACAT GGTGCGCCAA
GGTGTGTTTG GCGAGCTGCT CCACGGTGAG GCGGCTTATA TCCATGAGCT GCGCTGGCAA
ATGAAGGAAA TCGACCATAA AACTGGTTCG TGGCGCACCT ACTGGCACAC CAAACGCAAC
GGTAACTTAT ATCCGACCCA CGGCTTAGGG CCGATTTCTC AATATATGAA CATCAACCGC
GGTGACCGTT TCGATTATCT CACCTCCATG AGTTCACCCG CGCTCGGGCG CGCACTGTAT
GCCAAACGTG AATTCCCTGC CGATCATGAG CGTAATCAGC TCAAGTACAT CAATGGCGAT
ATGAGCACTA GCCTGATTAA AACCGTTAAG GGCCGAACCA TAATGGTTCA GCACGATACC
ACCACCCCTC GGCCCTACAG CCGCCATAAC CTTATCCAAG GAACCAATGG CGTTTTTGCC
GGGTTCCCAA ACCGGATTGC CGTTGAGCAC GGCGGCTTTG GTAAGAGTTA CCACGAGTGG
GATATGGACA TGCAAAAGTG GTATGACAAA TACGATCACC CACTGTGGCA ACGAATCGGT
AAAGAAGCCG AGATCAACGG CGGTCACGGC GGGATGGATT TTGTGATGCT CTGGCGTATG
GTCTATTGCC TACGTAACGG CGAGGCGCTC GATCAGGATG TCTACGATGG CGCCGCTTGG
TCTGTCGTAA ATATATTAAG TGAGCAATCG CTGAATAACC GCAGCAACTC GGTCAATTTC
CCCGACTTTA CCCGCGGCGC GTGGGAACAT GCCACGCCCT TAGGGATTGT CGGCGCTTAA
|
|---|
| Protein sequence | MHNIHRRHFL KAAGAVTAGL VTANIALNAN ASSVAPKPRV GKSVIGLIAP KMELVRVGFI
GVGERGFSHV EQFCHLEGVE LKAICDTHQA VIDRAVEHIV NQNRPKPAVY TGNDLSYREL
LNRDDIDIVI ISTPWEWHAP MAIDTMESGK HAFVEVPLAL TVEECWQLVD TAERTQKNCM
MMENVNYGRE ELMVLNMVRQ GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN
GNLYPTHGLG PISQYMNINR GDRFDYLTSM SSPALGRALY AKREFPADHE RNQLKYINGD
MSTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEH GGFGKSYHEW
DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM VYCLRNGEAL DQDVYDGAAW
SVVNILSEQS LNNRSNSVNF PDFTRGAWEH ATPLGIVGA
|
|---|
| |