Gene Shewmr7_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1437 
Symbol 
ID4258553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1672010 
End bp1672909 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content50% 
IMG OID638122086 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_737493 
Protein GI114046943 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.080472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA AGGCAAGTCA ATCGCAGGGG CTATTACTGT TTCGGTTATC TCAAACACAG 
GTCTTTGCTC TGGGCACGCT TAAAATCCGT GAGTTAGTGC CTTACACTCC GCTGAGTAAA
ATTCCTCAAT CTCATCCGAC GATCATGGGG GCGGCGACGA TTCGCGGCCA TACCATCCCC
GTGGTGGATA TGGCGGCTGC GATTGGATAT AAACCCATCA GTGATGAAGA ACGCCAACAT
TGCTATATCA TCATTACCGA TTGCCAGCGG ATGATTATCG GCTTTTTGGT GCGTGCAATC
GATAAGATTA TCGAGTGCAA TTGGCGTGAT ATTGAAGCGC CATCGGCTAA TTTAGGCCGT
AATGCCTTTT TAACCGGGGT GACGCGCTAC GATAATCAAC TGGTTCAGCT ACTCGACGTT
GAGTTGTTGC TGTCGAAAGT CTTCCCCGAT GCGCCTGAGG CCAATCGTGC GATTTTAACT
GACGTGCAGC GCGAGAAGTT AAAACCCATG CGTATTCTGC TGGTGGATGA TTCTAAGGTC
GCGCGCAAAC AACTCTCCGA TGCGCTCGAT AGCATCAATA TCCCTTATTT TGTTACCCCA
GATGGTAAAG ATGCGCTCTC AATTATGGAG CAAGCAGCGG CCGAGCATCA TCCGATTGAT
ATTCTTGTCA GCGATATTGA AATGCCAGGG CTAGATGGTT ATGAGCTGGC GTTTGAAGTC
CGCGATAATC CACTCCTCGC CAATGCCTAT ATTATTCTGC ATACCTCGCT GTCGAGTGAG
ATCAGCGTCA GCCAAGCCCA TCAAGTGGGC GCAAATGAGG CGCTCACTAA GTTTGATGCC
CACGAGTTGG TGGAAGCCAT GCTACGGGGC GCCGATTTAG CGGCCAAGCG AGCAAACTAG
 
Protein sequence
MKSKASQSQG LLLFRLSQTQ VFALGTLKIR ELVPYTPLSK IPQSHPTIMG AATIRGHTIP 
VVDMAAAIGY KPISDEERQH CYIIITDCQR MIIGFLVRAI DKIIECNWRD IEAPSANLGR
NAFLTGVTRY DNQLVQLLDV ELLLSKVFPD APEANRAILT DVQREKLKPM RILLVDDSKV
ARKQLSDALD SINIPYFVTP DGKDALSIME QAAAEHHPID ILVSDIEMPG LDGYELAFEV
RDNPLLANAY IILHTSLSSE ISVSQAHQVG ANEALTKFDA HELVEAMLRG ADLAAKRAN