Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1422 |
Symbol | |
ID | 4258433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1647718 |
End bp | 1648296 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122056 |
Product | thymidine kinase |
Protein accession | YP_737478 |
Protein GI | 114046928 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.460355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCAAT TGTATTTTTA CTATTCAGCA ATGAATGCGG GTAAATCCAC CTCTCTATTA CAATCTTCCT ATAACTACCG CGAGCGCGGC ATGAATACCT TAGTGATGAC GGCCTCTATC GATGACAGAT ACGGTAAAGG TAAGGTGGCA TCGCGTATTG GTATTGAAAC CGATGCCCAG GTATTTAGCA GCCATGACAA TCTGATAGAC ATGATCACCA CTGCCCACAA ACAGAATCAC TTGAGTTGTG TGCTGGTGGA CGAATGCCAA TTCTTAAGTA AAGAGCAAGT CAAACAACTG ACTTATGTTG TTGATAAAAT TGATATCCCT GTTTTGTGCT ATGGTTTACG TACCGACTTC CAAGGCGAAC TCTTCACTGG CAGCCATTAT TTGTTGGCAT GGGCCGATAA GTTAGTCGAG CTGAAAACCA TTTGTCACTG TGGACGCAAA GCCAATATGG TGGTGCGTCT CGATGGCGAA GGTAAAGTGA TGCGCGAAGG TGAGCAGGTG GCGATCGGCG GTAATGAAAG TTACGAATCG GTTTGCCGTA AGCATTTTCG TGAATTTATT TGGGATTGA
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Protein sequence | MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVMTASI DDRYGKGKVA SRIGIETDAQ VFSSHDNLID MITTAHKQNH LSCVLVDECQ FLSKEQVKQL TYVVDKIDIP VLCYGLRTDF QGELFTGSHY LLAWADKLVE LKTICHCGRK ANMVVRLDGE GKVMREGEQV AIGGNESYES VCRKHFREFI WD
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