Gene Shewmr7_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1422 
Symbol 
ID4258433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1647718 
End bp1648296 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID638122056 
Productthymidine kinase 
Protein accessionYP_737478 
Protein GI114046928 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.460355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAAT TGTATTTTTA CTATTCAGCA ATGAATGCGG GTAAATCCAC CTCTCTATTA 
CAATCTTCCT ATAACTACCG CGAGCGCGGC ATGAATACCT TAGTGATGAC GGCCTCTATC
GATGACAGAT ACGGTAAAGG TAAGGTGGCA TCGCGTATTG GTATTGAAAC CGATGCCCAG
GTATTTAGCA GCCATGACAA TCTGATAGAC ATGATCACCA CTGCCCACAA ACAGAATCAC
TTGAGTTGTG TGCTGGTGGA CGAATGCCAA TTCTTAAGTA AAGAGCAAGT CAAACAACTG
ACTTATGTTG TTGATAAAAT TGATATCCCT GTTTTGTGCT ATGGTTTACG TACCGACTTC
CAAGGCGAAC TCTTCACTGG CAGCCATTAT TTGTTGGCAT GGGCCGATAA GTTAGTCGAG
CTGAAAACCA TTTGTCACTG TGGACGCAAA GCCAATATGG TGGTGCGTCT CGATGGCGAA
GGTAAAGTGA TGCGCGAAGG TGAGCAGGTG GCGATCGGCG GTAATGAAAG TTACGAATCG
GTTTGCCGTA AGCATTTTCG TGAATTTATT TGGGATTGA
 
Protein sequence
MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVMTASI DDRYGKGKVA SRIGIETDAQ 
VFSSHDNLID MITTAHKQNH LSCVLVDECQ FLSKEQVKQL TYVVDKIDIP VLCYGLRTDF
QGELFTGSHY LLAWADKLVE LKTICHCGRK ANMVVRLDGE GKVMREGEQV AIGGNESYES
VCRKHFREFI WD