| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1420 |
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| Symbol | |
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| ID | 4258431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1642885 |
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| End bp | 1645035 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122054 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_737476 |
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| Protein GI | 114046926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.712278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.509514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAA GTTTTATTGC CATCGCCATT GGCGCCACTT TGATGACAGG CACACTCGCA
GGCTGCAGCA CTCAAGATAC TAAAGCGACT AATGTGACCG CAGTTCAAGC CCAAAATCCT
CTGTTCCAAG CCAGCACGCT GCAATACCAA GCGCCTGATT TTAGTGTCAT TAAAGACGAG
CATTTTCAGC CCGCATTAGA GCAAGGCATT AAAGAGCATT ATCAAGAGAT TTTGGCCATT
GCCAACAATC CTGCCGCCCC GACTTTCGAC AACACGATTG TCGCCATGGA AAAAAGCGGT
GCCCTGCTGA CCCGTGCATC GAGCGTGTTC TACAACCTCG CGGGTTCAAA CAGCAATCCT
GCCCTGCGTA AAATCCAAGG TGAGATGGCC CCGAAAATGG CGGCTCACTC AGATAACATC
AACCTCAATC CAGCACTATT CGCCCGTATT GAAACTATTT ATAACGACCG CAATAACTTA
GGCTTAACGC CTGAAGCGGT ACGTTTGGTT GAGGTGTATC ACCAACGCTT TATCATGGCC
GGCGCTAAAC TGACCGATGA GCAGAAAGTG AAGATCCGCG CTCTGAACGA AGAACAATCG
ACGCTGACCA ACGAGTTCTC ACAACGTTTA CTGCGCTTAA CCAAAGAAAT CGCCATCGTT
GTCGATAACA AAGAGCAACT GGCGGGCCTG ACTGACAGCG AAATCACCTC AGCAGCAAAC
GATGCCAAGG CCGCGGGCCA CGAAGGTAAG TACTTAATCA ACATCACCAA CACCACTCGC
CAGCCAGTGC TCGCCTCTTT AGAGAACCGT GAACTGCGCC AACGCATTTG GGAAGCCTCG
GCAAACCGTG GCTTAACGGG TGAAAACGAA ACCGCATCTT TAGTGTCTCG CCTTGCGCAA
TTACGTGCTG AGCGTGCCGC CCTATTAGGT TATGAAAACT GGGCCAGCTA CCGCCTCGCG
CCACAAATGG CAAAAACGCC TGAAGCGGTA TACAGCATGT TTGGTTCAAT GGTGCCAGCC
GTCGTGGCCA ATACCGAGAA AGAAGCAGCC GATATCCAAG CGATGATCGA CAAGACTGGC
GGCAAGTTTG AACTCGCGCC ATGGGACTGG GAATTCTACG CCGAGAAGGT TCGCCAAGAA
AAATACGCCC TCGATGCCAA TAGCATTCGC CCTTATTTCG AATTTAACCG CGTACTCGAA
GACGGCGTGT TCTACACCCT CAAAGAACTC TATGGCGTCA CCTTAAAGCC ACGCCCAGAT
TTACCCGTGT ACCACCCGGA TGTGAAAGCC TACGAAATGT TTGATGCCGA TGGTTCGAGC
ATGGCGATTT TCTATGCCGA CTACTTTGCC CGAGAAGGCA AACGCGGCGG CGCATGGATG
AGCTCGTTCG TGGGTCAATC CTTCCTCGAA GGCACTAAGC CTGTCGTGGT CAACGTGATG
AACATTAAGA AGGCGCCAGA GGGACAACCG ACCTTCGTCA GCTACAACGA AGTCACCACT
ATGTTCCACG AAATGGGCCA CGGTACCCAC GGTATGTTCT CTAAGGTGAC TTACCCAAGC
TTGGCAGGTA CTTCGGTCTC CCGTGACTTT GTGGAATTCC CATCAACCTT CGAAGAAGAC
TGGGCAGCCC ACCCTAAAGT GTTAGCCAAC TACGCCAAAC ACTACGAAAC TGGTAAGCCA
ATTCCCGATG ATTTGCTGCA AAAACTGCTC AAATCAGGCA GCTTTAACCA AGGCTTCGAT
ACCTTAGAGT ATATGGCTGC AGCGCTCGTC GACATGGAAT GGCACTCATT AAGCCCTGAT
GCCCCACTGC AAGATGTGGC GACATTCGAA GCCAATGCGC TGAAAAAACA CGGCTTAAAT
ATCACTGCCG TGCCACCACG TTATAAGTCA ACTTACTTTG CCCACGCCTT CCCGGGTGGT
TACTCAGCGA GTTACTACGC TTATATGTGG AGTGAGATTT TAGCGGCAGA TGCCTACGCT
TACGTGCAAA CTCAAGGTGG CCTAAACCGT GAAATCGGCA TGAAATACCG CAAGACGATT
CGCGAAGTGG GCAACAGCAT TGCCCCAATG GAAGCTTACA AGAACTTCCG TGGTCAAGAG
CCTACTACCG AAGGGTTATT GAACCGCCGT GGACTCAACA CTGCTCTGTA A
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| Protein sequence | MRKSFIAIAI GATLMTGTLA GCSTQDTKAT NVTAVQAQNP LFQASTLQYQ APDFSVIKDE
HFQPALEQGI KEHYQEILAI ANNPAAPTFD NTIVAMEKSG ALLTRASSVF YNLAGSNSNP
ALRKIQGEMA PKMAAHSDNI NLNPALFARI ETIYNDRNNL GLTPEAVRLV EVYHQRFIMA
GAKLTDEQKV KIRALNEEQS TLTNEFSQRL LRLTKEIAIV VDNKEQLAGL TDSEITSAAN
DAKAAGHEGK YLINITNTTR QPVLASLENR ELRQRIWEAS ANRGLTGENE TASLVSRLAQ
LRAERAALLG YENWASYRLA PQMAKTPEAV YSMFGSMVPA VVANTEKEAA DIQAMIDKTG
GKFELAPWDW EFYAEKVRQE KYALDANSIR PYFEFNRVLE DGVFYTLKEL YGVTLKPRPD
LPVYHPDVKA YEMFDADGSS MAIFYADYFA REGKRGGAWM SSFVGQSFLE GTKPVVVNVM
NIKKAPEGQP TFVSYNEVTT MFHEMGHGTH GMFSKVTYPS LAGTSVSRDF VEFPSTFEED
WAAHPKVLAN YAKHYETGKP IPDDLLQKLL KSGSFNQGFD TLEYMAAALV DMEWHSLSPD
APLQDVATFE ANALKKHGLN ITAVPPRYKS TYFAHAFPGG YSASYYAYMW SEILAADAYA
YVQTQGGLNR EIGMKYRKTI REVGNSIAPM EAYKNFRGQE PTTEGLLNRR GLNTAL
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