Gene Shewmr7_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1417 
Symbol 
ID4258428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1639152 
End bp1639901 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content45% 
IMG OID638122051 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_737473 
Protein GI114046923 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000497046 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.43378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TGGTGCCTGT TAAGCGCGTA GTTGATGCCA ATGTGAAGGT CAGGGTAAAA 
GCTGACAACA CCAGCGTTGA TACCGCAAAC CTCAAAATGG CGTTGAACCC TTTTTGTGAA
ATTGCAGTAG AAGAAGCGGT TCGTTTAAAA GAAGCGGGCA GTGCTACTGA AGTAGTGGTC
GTCAGTATCG GCAATAAAGC CGTTCAAGAA CAATTACGTA CCGCGTTAGC ATTAGGTGCT
GACCGTGCGA TTCACATTGA TACTGAAGAA GAGTTAACCC CAGTATCGAT TGCCAAATTA
CTCAAAGCCG TACAAGAAAA AGAACAAGCA CAATTAGTGC TGTTTGGTAA GCAATCTATC
GATGGCGATA ATAACCAAAC AGGTCAAATG TTTGCGGCAT TAACGGATAT GCCACAGGCA
ACTTTTGCTT CTGAAATCAA AGTGGAAGGC AATTCAGTGC AAGTGGCTCG CGAGATTGAT
GGCGGGATGC AAACCTTAAG TCTGCCATTG CCAGCCGTGG TGACCGCCGA TTTACGTTTG
AACGAACCAC GTTACGCTTC ATTACCTAAC ATCATGAAAG CTAAACGTAA GCCATTAGAT
GTGCTCACTG TTGCGGATTT AGGTGTGACG CTAAAAGCCC ATCAAACTGT GGTGAAGGTG
ACGCCGCCTG CCGAACGTAA AGCGGGTATC ATGGTTGCGT CTGTAGCTGA GCTGGTTGAA
AAGTTAAAGA ATGAAGCGAA GGTGATCTAA
 
Protein sequence
MKVLVPVKRV VDANVKVRVK ADNTSVDTAN LKMALNPFCE IAVEEAVRLK EAGSATEVVV 
VSIGNKAVQE QLRTALALGA DRAIHIDTEE ELTPVSIAKL LKAVQEKEQA QLVLFGKQSI
DGDNNQTGQM FAALTDMPQA TFASEIKVEG NSVQVAREID GGMQTLSLPL PAVVTADLRL
NEPRYASLPN IMKAKRKPLD VLTVADLGVT LKAHQTVVKV TPPAERKAGI MVASVAELVE
KLKNEAKVI