| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1414 |
|---|
| Symbol | |
|---|
| ID | 4258425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1633886 |
|---|
| End bp | 1635175 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737470 |
|---|
| Protein GI | 114046920 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.861913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.154927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT TACCCACTAG CTTGCTGCTG TCGACACTGG CGATCACGCT GTCAGCCCAG
GCACATAATC TCATCCCTGC GGGCAAACAA ACCCAGAGCG TGCTGATTAA AAACGCCACA
GTGCATACCG TCAGCCAAGG GACATTAACC AATACCGATG TGTTGATTGA GCAAGGTAAA
ATCAGCGCCA TCGGGCCACA GCTAAGCATC AACGGCGCTG ATGGCCAAGC GCAGGTCATC
GATGCCACGG GCAAACACTT ATACCCCGGC CTTATCGCGC TCGATACCAG TCTTGGTTTA
GTAGAAATCG AGATGGTGCG CCCAACCGTC GATAATGCAG AAGTCGGAGA TTTTAATCCG
CAAATTAGCG CGGCAACGGC TTACAACCCA GATTCAGAGC TGTTGCCAAC CATTCGTTAC
AATGGCATCA CCCACGCACA AATCGTCCCC AGTGGGGATG GATTAGCCGG CCAATCTGTG
GTCGTCGACC TCGATGCTTG GACAATTGAG GACGCCCTGC AACCAAGCGA AGGCCAATTC
CATGTTTACT GGCCGCAAAT CAAGCGTATG CCTGAGGATG AAAAGGAAAA AGCTAAGGTC
ATTGAGAAAA ATCAGCAGGC CATAGATACA CTGACCACTG CCTTTGAGGA TGGCTATCGC
TACTTTTTAA GCCATAAGGC AAAGGATTCG GCCAAGACAA CCAATTTACG TTGGCAGGCC
ATGCTGCCCC TGTACCAAGG TAAGGCCACG CTTTTTGCCC ATGCGGACAG CGTCAGCCAA
ATTGAGCAAG TCATTGCCCT GACTAAAAAA TATCAATTTA AATTGGTGAT TGTCGGTGGC
TATGATGCAT GGCGACTCGC TTCAAGCTTA AGGGAAGTGA ACGCCAGTGT GATTTACCCG
CACACCCTGA GTCTGCCTAA ACGTAAAGAT GAACCCGTGG ATTTACCCTT TAAAATCCCT
TCGTTGCTGG CAAGTGCAGG CATTCCCTAT GCCCTTGGAT TTTCATCGGA TTGGAACAGT
CGTAACCTCC CCTATGCTGC GGGCTATAGT GCCGCTTACG GCGTCACGCC CGAGCAAGCA
TTAAAATCGG TGACTTTAGA TGCAGCAAAA CTGCTGGGGA TCGCCGATTT AGGGGCCATC
GCCGTCGGTT ATCAGGGCAG TGTTGTGCTG AGTGACGGGG ATATCCTCGA CCCCATGAGC
AACAAAATTG ATGCGATCTG GATTGAAGGA CGGCAAATAG ATCTGAATAA TCGCCACCAG
CAGCTTTATC AAAAGTATCT TAAGCGCTAG
|
|---|
| Protein sequence | MKHLPTSLLL STLAITLSAQ AHNLIPAGKQ TQSVLIKNAT VHTVSQGTLT NTDVLIEQGK
ISAIGPQLSI NGADGQAQVI DATGKHLYPG LIALDTSLGL VEIEMVRPTV DNAEVGDFNP
QISAATAYNP DSELLPTIRY NGITHAQIVP SGDGLAGQSV VVDLDAWTIE DALQPSEGQF
HVYWPQIKRM PEDEKEKAKV IEKNQQAIDT LTTAFEDGYR YFLSHKAKDS AKTTNLRWQA
MLPLYQGKAT LFAHADSVSQ IEQVIALTKK YQFKLVIVGG YDAWRLASSL REVNASVIYP
HTLSLPKRKD EPVDLPFKIP SLLASAGIPY ALGFSSDWNS RNLPYAAGYS AAYGVTPEQA
LKSVTLDAAK LLGIADLGAI AVGYQGSVVL SDGDILDPMS NKIDAIWIEG RQIDLNNRHQ
QLYQKYLKR
|
|---|
| |