Gene Shewmr7_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1412 
Symbol 
ID4258423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1632599 
End bp1633333 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID638122046 
Producthypothetical protein 
Protein accessionYP_737468 
Protein GI114046918 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0670544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTA CCAACCAGAT TACCGCTGTC GCCACTTGCC GTACTCCCTA TAAACAAAAA 
TTTGGCATTC CACGGCAGCC CGGTTTGGTG GAGGCGCGCG GTTATGTTGA GCTGGAGCCC
CATGTCAATC ATCTCGATGC CGTGCGCGGT ATCGAGCAAT ATTCCCACCT TTGGTTGTTG
TTTTGTTTCC ATGAGAATCT CGCCCAAGGG TGGAAAACGA CGGTACGCCC GCCCCGTTTA
GGCGGCAATG AAAAACTCGG CGTATTCGCG ACTCGCTCGA CCTTTCGCCC GAATGGCATA
GGTCAATCCG TGGTCAAACT CCATAGGGTG GTGCAACATA AAGGCAAAGT GTGCCTAGAG
ATTTCGGGCA TGGACCTTGT CGATGGCACG CCCATTATCG ATATTAAGCC CTATATTCCG
TTCTCGGATT CGATTGAAGG TGCCGTCGGC GGTATCGCGC AAGAAGCACC AAAACTTATC
AGCGTGGTGT TTTCCGAACT CGCCGCAACC CAGATTGATG CTTACAGCAA GCAGGACGCC
TATACCGATT TAGCCGTACT CATCCACGGC GTGCTGGGGC AAGACCCCCG CCCTGCCTAT
AAAAAAGCCA AAGATGACCC CAAATTATAT CAAGTGGCTT TGTATGATTT AGATATCTTT
TGGCGGATGG AGGTCGATGA GGATGAGCGG GAATACATTC AGGTATTAGA ACTCAAACCG
GGGAAATGTG GCTAA
 
Protein sequence
MTFTNQITAV ATCRTPYKQK FGIPRQPGLV EARGYVELEP HVNHLDAVRG IEQYSHLWLL 
FCFHENLAQG WKTTVRPPRL GGNEKLGVFA TRSTFRPNGI GQSVVKLHRV VQHKGKVCLE
ISGMDLVDGT PIIDIKPYIP FSDSIEGAVG GIAQEAPKLI SVVFSELAAT QIDAYSKQDA
YTDLAVLIHG VLGQDPRPAY KKAKDDPKLY QVALYDLDIF WRMEVDEDER EYIQVLELKP
GKCG