| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1411 |
|---|
| Symbol | |
|---|
| ID | 4258422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1631969 |
|---|
| End bp | 1632598 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638122045 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_737467 |
|---|
| Protein GI | 114046917 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0665218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGC CAATCACAAC GGCCTTGCCT GATTATCAAA GCCAACATAA AAAGCGTCTA
TCTTGGATGC CCTGGCTGTA TTTTTCGCTC AAAGAAAAAC ACTTAGTCTG GGCCAAACCT
TGGCAGGATG AAGTGCAGGC CAACCTTTGC GCGCTCGAAA CCGTGACCAT TGGCGAAAAC
TGTTTTATTG CGCCCGAAGC AAAGTTATTT GCTGAGCCCA ATCGCGATAT CACAATCGGT
AATCGCTGCA TGATCGCGGC TGAATGCTTT TTGCACGGCC CTATCACGCT CGGTGATGAA
GTCGCTATCA ATCACGGCTG CTCCTTCGAT GGTGGCCGAG TGGGCATTCA GATTGGCTCC
CAAACCCGCA TTGCTAACCA TGTCACTATT TATGCGTTTA ATCATGGCAT GGCACCCGAT
ACGCCCATTT ATCAACAAGC CTCAAACTCT AAAGGAGTCG TGATAGGTAA AGATGTGTGG
ATTGGCGCAC AGGCAGGGAT AGTCGATGGT GTCACCATTG GCGACCATGC AGTGATCGGC
ATGGGCTGTA TTGTCACTAA AGATGTTCCC GCATGGGCCA TCGTCGCGGG CAACCCCGCC
CGGGTGATTG GCGATAGGCG GGATAAATAA
|
|---|
| Protein sequence | MQTPITTALP DYQSQHKKRL SWMPWLYFSL KEKHLVWAKP WQDEVQANLC ALETVTIGEN
CFIAPEAKLF AEPNRDITIG NRCMIAAECF LHGPITLGDE VAINHGCSFD GGRVGIQIGS
QTRIANHVTI YAFNHGMAPD TPIYQQASNS KGVVIGKDVW IGAQAGIVDG VTIGDHAVIG
MGCIVTKDVP AWAIVAGNPA RVIGDRRDK
|
|---|
| |