Gene Shewmr7_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1406 
Symbol 
ID4258575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1626513 
End bp1627298 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content43% 
IMG OID638122040 
Producthypothetical protein 
Protein accessionYP_737462 
Protein GI114046912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0730107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCCT ATATCACCCC GTTGGCACTG CTTATCAGCT CAGTGTTTTT ACCTACCGCT 
AAAGCCAATA CTCAACTGTT TGTAAGCACC TCAGCCTCTA ATTCGCCGCA GCTACAAATT
ACCTATCCCT CTGCGATTCG AGTAGGACAA GCTGTACAGG ATGGATTAGC ACAGCTTCCA
CTTTATAATC AAACTACAAG AGACGAAGCT ATATCGATTT ACTGGTTAGG CGCAACTTTG
CTAGATCTAC AAAATACAGC CAAACTAGAA GCCACTCGCC AGCATGTATT GCAGCAATTG
GCAAATATGG GACAGCAAGC AGACAATAGT CAGTATATTG CGAAGCTTTC CAAATTTGCA
CAGTTCCTCC GAAATATTAA ACTCGGACAA AGAGTTAATC AGCCATTAGA TCTCGATTTA
ATCCGCATTA CCGATGCCTA TAACCCCATT ATCGACGGTC AATTTTTATT AGTGTTGCCA
CCACGCCCAA CAACAGTCAC TGTAGTTGGT GCCGTGGCAC AAACCGGTGA ACAAGAGTGG
CAATCGCGAG CCAGCAGTAA AAATTACTTG AAGCAAGCAG GTTTACTCGA TAATGCAGAA
AATAGCTTTG TATGGATAAT TCAACCCGAT GGTAACGCTA TTCGCCAACC TATCGCCTAT
TGGAATCATC AAGCTCAGGA TATCGCTCCT GGTGCAGTAC TCTTTGTTGA GTTTTCAGCT
CTCTTTGACG GCTATAGCAC ATTAAACAAC AACATTATTG AATTACTCAA AAATCGGGCT
CTGTAA
 
Protein sequence
MRSYITPLAL LISSVFLPTA KANTQLFVST SASNSPQLQI TYPSAIRVGQ AVQDGLAQLP 
LYNQTTRDEA ISIYWLGATL LDLQNTAKLE ATRQHVLQQL ANMGQQADNS QYIAKLSKFA
QFLRNIKLGQ RVNQPLDLDL IRITDAYNPI IDGQFLLVLP PRPTTVTVVG AVAQTGEQEW
QSRASSKNYL KQAGLLDNAE NSFVWIIQPD GNAIRQPIAY WNHQAQDIAP GAVLFVEFSA
LFDGYSTLNN NIIELLKNRA L